RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 JMJD4Q9H9V9 463 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 ZNF215Q9UL58 517 aaPredicted RBP10.04□□□□□ -0.8
SCRN1-208ENST00000438497 LRFN2Q9ULH4 789 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 NR2E1Q9Y466 385 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 NRCAMQ92823 1304 aa10.04□□□□□ -0.8
SCRN1-208ENST00000438497 CCER2I3L3R5 266 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 BRD1O95696 1058 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 DMDP11532 3685 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 CCND2P30279 289 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 CD52P31358 61 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 ERVFC1P60507 584 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 UBE3AQ05086 875 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 MTMR3Q13615 1198 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 NEDD9Q14511 834 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 DUSP6Q16828 381 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 ANKRD54Q6NXT1 300 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 TMEM184AQ6ZMB5 413 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 RUFY4Q6ZNE9 571 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 NPAS4Q8IUM7 802 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 CRIPAKQ8N1N5 446 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 PNMA1Q8ND90 353 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 VN1R2Q8NFZ6 395 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 RMDN1Q96DB5 314 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 GPR20Q99678 358 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 AMNQ9BXJ7 453 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 DCTPP1Q9H773 170 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 AAASQ9NRG9 546 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 TMEM260Q9NX78 707 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 U3KPZ7 1027 aaPredicted RBP10.03□□□□□ -0.8
SCRN1-208ENST00000438497 TTC41PQ6P2S7 1318 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 CCDC171Q6TFL3 1326 aa10.03□□□□□ -0.8
SCRN1-208ENST00000438497 PLXNA4Q9HCM2 1894 aa10.02□□□□□ -0.8
SCRN1-208ENST00000438497 HOXB8P17481 243 aaPredicted RBP10.02□□□□□ -0.81
SCRN1-208ENST00000438497 HOXA13P31271 388 aaPredicted RBP10.02□□□□□ -0.81
SCRN1-208ENST00000438497 HAND2P61296 217 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 MGAT3Q09327 533 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 CCDC178Q5BJE1 867 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 PDE12Q6L8Q7 609 aaKnown RBP10.02□□□□□ -0.81
SCRN1-208ENST00000438497 TAF2Q6P1X5 1199 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 SYCE2Q6PIF2 218 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 TSHZ1Q6ZSZ6 1077 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 SAMD3Q8N6K7 520 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 IL31RAQ8NI17 732 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 DNAJB3Q8WWF6 145 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 FTHL17Q9BXU8 183 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 KAT14Q9H8E8 782 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 AGO3Q9H9G7 860 aaKnown RBP10.02□□□□□ -0.81
SCRN1-208ENST00000438497 CDY2AQ9Y6F7 541 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 KIAA1671Q9BY89 1806 aa10.02□□□□□ -0.81
SCRN1-208ENST00000438497 SPATA31C2B4DYI2 1134 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 OPLAHO14841 1288 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 FGF18O76093 207 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 PARP1P09874 1014 aaKnown RBP10.01□□□□□ -0.81
SCRN1-208ENST00000438497 SCG2P13521 617 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 IBSPP21815 317 aaPredicted RBP10.01□□□□□ -0.81
SCRN1-208ENST00000438497 GATMP50440 423 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 GHRHRQ02643 423 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 KCNC3Q14003 757 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 PUM1Q14671 1186 aaKnown RBP eCLIP10.01□□□□□ -0.81
SCRN1-208ENST00000438497 GNPTABQ3T906 1256 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 ASPRV1Q53RT3 343 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 IER5Q5VY09 327 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 CES5AQ6NT32 575 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 LLGL2Q6P1M3 1020 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 METTL7BQ6UX53 244 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 FCHSD1Q86WN1 690 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 TRIM50Q86XT4 487 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 THNSL1Q8IYQ7 743 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 KIAA2013Q8IYS2 634 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 FLCNQ8NFG4 579 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 PI4K2BQ8TCG2 481 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 LINC01599Q8WXQ3 324 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 ESR2Q92731 530 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 HELLSQ9NRZ9 838 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 RTEL1Q9NZ71 1219 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 LIMD1Q9UGP4 676 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 PUF60Q9UHX1 559 aaKnown RBP10.01□□□□□ -0.81
SCRN1-208ENST00000438497 PADI3Q9ULW8 664 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 PCDHB7Q9Y5E2 793 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 PCDHA1Q9Y5I3 950 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 SQORQ9Y6N5 450 aa10.01□□□□□ -0.81
SCRN1-208ENST00000438497 DOCK5Q9H7D0 1870 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 CACNA1BQ00975 2339 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 TRIM6-TRIM34B2RNG4 842 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 C2CD4DB7Z1M9 353 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 GCOM1H8Y6P7 765 aaPredicted RBP10□□□□□ -0.81
SCRN1-208ENST00000438497 PI15O43692 258 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 ASGR2P07307 311 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 POLR2MP0CAP2 368 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 PCP11498 1178 aaKnown RBP10□□□□□ -0.81
SCRN1-208ENST00000438497 MRPS6P82932 125 aaKnown RBP10□□□□□ -0.81
SCRN1-208ENST00000438497 SP4Q02446 784 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 IQCA1Q86XH1 822 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 RASGRP4Q8TDF6 673 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 CNTNAP3BQ96NU0 1288 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 SEMA4AQ9H3S1 761 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 SMOC2Q9H3U7 446 aa10□□□□□ -0.81
SCRN1-208ENST00000438497 RNF41Q9H4P4 317 aaPredicted RBP10□□□□□ -0.81
SCRN1-208ENST00000438497 TELO2Q9Y4R8 837 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms