RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PDE6CP51160 858 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 IRAK1P51617 712 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 USP17L24Q0WX57 530 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 SLC18A3Q16572 532 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 EARS2Q5JPH6 523 aaKnown RBP7.26□□□□□ -1.25
CSDE1-205ENST00000438362 HHATQ5VTY9 493 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 FYB2Q5VWT5 728 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 TTI2Q6NXR4 508 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 USP17L6PQ6QN14 398 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 FAM196AQ6ZSG2 479 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 TMC4Q7Z404 712 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 FBXO33Q7Z6M2 555 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 NACC1Q96RE7 527 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 ZMYND12Q9H0C1 365 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 TYW1Q9NV66 732 aaKnown RBP7.26□□□□□ -1.25
CSDE1-205ENST00000438362 PTPN22Q9Y2R2 807 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 ARHGAP23Q9P227 1491 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 A0A087X0B3 334 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 EIF3HO15372 352 aaKnown RBP eCLIP7.26□□□□□ -1.25
CSDE1-205ENST00000438362 NR3C1P04150 777 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 HARSP12081 509 aaKnown RBP7.26□□□□□ -1.25
CSDE1-205ENST00000438362 AP3B2Q13367 1082 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 KNOP1Q1ED39 458 aaKnown RBP7.26□□□□□ -1.25
CSDE1-205ENST00000438362 MS4A14Q96JA4 679 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 NBPF3Q9H094 633 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 RBM12Q9NTZ6 932 aaKnown RBP7.26□□□□□ -1.25
CSDE1-205ENST00000438362 KBTBD4Q9NVX7 518 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 AGTPBP1Q9UPW5 1226 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 ZNF335Q9H4Z2 1342 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-205ENST00000438362 SUN1O94901 812 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 SERPINB2P05120 415 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 UAP1Q16222 522 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-205ENST00000438362 DCUN1D2Q6PH85 259 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 SH3RF1Q7Z6J0 888 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 SH2D3CQ8N5H7 860 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 SMC6Q96SB8 1091 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.26□□□□□ -1.25
CSDE1-205ENST00000438362 WDR11Q9BZH6 1224 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 SMARCAL1Q9NZC9 954 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 STK38LQ9Y2H1 464 aa7.26□□□□□ -1.25
CSDE1-205ENST00000438362 GMNCA6NCL1 334 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 PPP1R37O75864 691 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 BMP3P12645 472 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 STRN3Q13033 797 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 SLMAPQ14BN4 828 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 FIGNQ5HY92 759 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 WDR78Q5VTH9 848 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 NSMFQ6X4W1 530 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 RHOT2Q8IXI1 618 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 SPICE1Q8N0Z3 855 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 ZNF653Q96CK0 615 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 JPH2Q9BR39 696 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-205ENST00000438362 DNAI2Q9GZS0 605 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.25□□□□□ -1.25
CSDE1-205ENST00000438362 DNAJC12Q9UKB3 198 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 DUSP10Q9Y6W6 482 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 PEAK1Q9H792 1746 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 POTEFA5A3E0 1075 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 LRRC10BA6NIK2 292 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 SFI1A8K8P3 1242 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 USP17L10C9JJH3 530 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 RASGRF2O14827 1237 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 POTEIP0CG38 1075 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 ATF2P15336 505 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 TNNI1P19237 187 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 PCK1P35558 622 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 SLCO1A2P46721 670 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 MFAP3P55082 362 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 HERVK_113P62684 666 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 POTEGQ6S5H5 508 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 POTEEQ6S8J3 1075 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 NLRP14Q86W24 1093 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 CCDC13Q8IYE1 715 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 DAGLBQ8NCG7 672 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 TCP11Q8WWU5 503 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.25□□□□□ -1.251e-7■■■■□ 24.2
CSDE1-205ENST00000438362 VPS37BQ9H9H4 285 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.25□□□□□ -1.25
CSDE1-205ENST00000438362 UBE2TQ9NPD8 197 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-205ENST00000438362 C1orf112Q9NSG2 853 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 DIS3Q9Y2L1 958 aaKnown RBP7.25□□□□□ -1.25
CSDE1-205ENST00000438362 MYO1FO00160 1098 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 PLEKP08567 350 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-205ENST00000438362 MAGOHP61326 146 aaKnown RBP7.25□□□□□ -1.25
CSDE1-205ENST00000438362 UBXN2AP68543 259 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 ARHGAP4P98171 946 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 GUCY1A3Q02108 690 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 XKR9Q5GH70 373 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 FAM102BQ5T8I3 360 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 HIBCHQ6NVY1 386 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-205ENST00000438362 VGLL2Q8N8G2 317 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 PPFIBP2Q8ND30 876 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 NT5C1BQ96P26 610 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 FERMT1Q9BQL6 677 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 ZNF577Q9BSK1 485 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 DHX36Q9H2U1 1008 aaKnown RBP7.25□□□□□ -1.25
CSDE1-205ENST00000438362 SLITRK6Q9H5Y7 841 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.25□□□□□ -1.25
CSDE1-205ENST00000438362 SNX24Q9Y343 169 aa7.25□□□□□ -1.25
CSDE1-205ENST00000438362 PLEKHG2Q9H7P9 1386 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms