RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 C16orf86Q6ZW13 317 aa12.71□□□□□ -0.38
PDLIM5-206ENST00000437932 LRRC45Q96CN5 670 aa12.71□□□□□ -0.38
PDLIM5-206ENST00000437932 C7orf25Q9BPX7 421 aa12.71□□□□□ -0.38
PDLIM5-206ENST00000437932 A0A1W2PQC6 194 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 BEND6Q5SZJ8 279 aaPredicted RBP12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 ALKBH5Q6P6C2 394 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 HDAC7Q8WUI4 952 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 TEKT3Q9BXF9 490 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 SAMD15Q9P1V8 674 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 POLLQ9UGP5 575 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 KIF1AQ12756 1690 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 MRC1P22897 1456 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 FRMD3A2A2Y4 597 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 NR3C1P04150 777 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 ANKS4BQ8N8V4 417 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 NEDD1Q8NHV4 660 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 CABS1Q96KC9 395 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 TNNI1P19237 187 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 E2F4Q16254 413 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 B4GALNT4Q76KP1 1039 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 KIAA0895Q8NCT3 520 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 QTRT2Q9H974 415 aaKnown RBP12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 MTUS1Q9ULD2 1270 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 SNX12Q9UMY4 172 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 CETN2P41208 172 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 PRPHP41219 470 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 STAT2P52630 851 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 ARHGEF16Q5VV41 709 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 STK38LQ9Y2H1 464 aa12.7□□□□□ -0.38
PDLIM5-206ENST00000437932 KRT14P02533 472 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 ARHGAP4P98171 946 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 RSPH10B2B2RC85 870 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 RSPH10BP0C881 870 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 PDE6BP35913 854 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 ANKFY1Q9P2R3 1169 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 TBK1Q9UHD2 729 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 BBOX1O75936 387 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 TMEM139Q8IV31 216 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 REEP2Q9BRK0 252 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 DNAJC12Q9UKB3 198 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 RCCD1A6NED2 376 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 PSMD2Q13200 908 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 THOC1Q96FV9 657 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 CCSER1Q9C0I3 900 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 KCNQ5Q9NR82 932 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 NR1D1P20393 614 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 SMTNP53814 917 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 TTI2Q6NXR4 508 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 TBC1D31Q96DN5 1066 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 ZMYND12Q9H0C1 365 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 MLXIPLQ9NP71 852 aa12.69□□□□□ -0.38
PDLIM5-206ENST00000437932 PGRMC1O00264 195 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 PSMD14O00487 310 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 ECE2O60344 883 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 GCLMP48507 274 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 WDR44Q5JSH3 913 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 CDC42EP5Q6NZY7 148 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 GLYCTKQ8IVS8 523 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 GDAP1Q8TB36 358 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 ZSCAN5CA6NGD5 496 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 RGS16O15492 202 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 PNMA8AQ86V59 439 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 IQCDQ96DY2 449 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 DNAJC7Q99615 494 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 SPZ1Q9BXG8 430 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 AMACRQ9UHK6 382 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 MMP10P09238 476 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 CHRNA5P30532 468 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 CARSP49589 748 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 EIF2AK1Q9BQI3 630 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 RTFDC1Q9BY42 306 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 GLT8D2Q9H1C3 349 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 PI4KBQ9UBF8 816 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 PCDHAC2Q9Y5I4 1007 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
PDLIM5-206ENST00000437932 EIF2AK2P19525 551 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 RPUSD2Q8IZ73 545 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 PPP1R16BQ96T49 567 aa12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 TRIM51Q9BSJ1 452 aa12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 CELF4Q9BZC1 486 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 ATMINO43313 823 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 C21orf2O43822 256 aa12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 KNOP1Q1ED39 458 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 KIFAP3Q92845 792 aa12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 SNX24Q9Y343 169 aa12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 NF2P35240 595 aa12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 HDLBPQ00341 1268 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 SHROOM1Q2M3G4 852 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 FAM133BQ5BKY9 247 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 NSRP1Q9H0G5 558 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 PARVGQ9HBI0 331 aa12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 TMOD4Q9NZQ9 345 aa12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 AGTPBP1Q9UPW5 1226 aa12.67□□□□□ -0.38
PDLIM5-206ENST00000437932 NOC2LQ9Y3T9 749 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms