RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ZBED6P86452 979 aa28.43■■■□□ 2.14
CPNE1-216ENST00000437340 NOL9Q5SY16 702 aaKnown RBP28.43■■■□□ 2.14
CPNE1-216ENST00000437340 RASSF10A6NK89 507 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 OAZ1P54368 228 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 PRKG1Q13976 671 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 MEA1Q16626 185 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 BMT2Q1RMZ1 405 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 SFR1Q86XK3 245 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 RUSC1Q9BVN2 902 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 MRPL44Q9H9J2 332 aaKnown RBP28.42■■■□□ 2.14
CPNE1-216ENST00000437340 OLFML3Q9NRN5 406 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 KCNH7Q9NS40 1196 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 NELFCDQ8IXH7 590 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 ZNF397Q8NF99 534 aaPredicted RBP28.42■■■□□ 2.14
CPNE1-216ENST00000437340 TRERF1Q96PN7 1200 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 JADE2Q9NQC1 790 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 TRAF3IP3Q9Y228 551 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 SIK3Q9Y2K2 1263 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 ZHX2Q9Y6X8 837 aa28.42■■■□□ 2.14
CPNE1-216ENST00000437340 RBBP6Q7Z6E9 1792 aaKnown RBP28.41■■■□□ 2.14
CPNE1-216ENST00000437340 NKRFO15226 690 aaKnown RBP eCLIP28.41■■■□□ 2.14
CPNE1-216ENST00000437340 RPS6P62753 249 aaKnown RBP28.41■■■□□ 2.14
CPNE1-216ENST00000437340 C1orf186Q6ZWK4 172 aa28.41■■■□□ 2.14
CPNE1-216ENST00000437340 PNMA8AQ86V59 439 aaPredicted RBP28.41■■■□□ 2.14
CPNE1-216ENST00000437340 ATG4CQ96DT6 458 aa28.41■■■□□ 2.14
CPNE1-216ENST00000437340 PCMTD1Q96MG8 357 aaPredicted RBP28.41■■■□□ 2.14
CPNE1-216ENST00000437340 HOMER2Q9NSB8 354 aa28.41■■■□□ 2.14
CPNE1-216ENST00000437340 USP2O75604 605 aaPredicted RBP28.4■■■□□ 2.14
CPNE1-216ENST00000437340 KNOP1Q1ED39 458 aaKnown RBP28.4■■■□□ 2.14
CPNE1-216ENST00000437340 TKFCQ3LXA3 575 aa28.4■■■□□ 2.14
CPNE1-216ENST00000437340 IL31RAQ8NI17 732 aa28.4■■■□□ 2.14
CPNE1-216ENST00000437340 PIGOQ8TEQ8 1089 aa28.4■■■□□ 2.14
CPNE1-216ENST00000437340 ADAMTS5Q9UNA0 930 aa28.4■■■□□ 2.14
CPNE1-216ENST00000437340 SLU7O95391 586 aaKnown RBP28.39■■■□□ 2.14
CPNE1-216ENST00000437340 POTEJP0CG39 1038 aa28.39■■■□□ 2.14
CPNE1-216ENST00000437340 DSG3P32926 999 aa28.39■■■□□ 2.14
CPNE1-216ENST00000437340 GNG11P61952 73 aa28.39■■■□□ 2.14
CPNE1-216ENST00000437340 CCDC40Q4G0X9 1142 aa28.39■■■□□ 2.14
CPNE1-216ENST00000437340 SLC30A10Q6XR72 485 aa28.39■■■□□ 2.14
CPNE1-216ENST00000437340 REPS2Q8NFH8 660 aa28.39■■■□□ 2.14
CPNE1-216ENST00000437340 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.39■■■□□ 2.144e-6■□□□□ 10.7
CPNE1-216ENST00000437340 CDCA5Q96FF9 252 aa28.39■■■□□ 2.14
CPNE1-216ENST00000437340 ZFP91Q96JP5 570 aaPredicted RBP28.39■■■□□ 2.14
CPNE1-216ENST00000437340 AGO4Q9HCK5 861 aaKnown RBP28.39■■■□□ 2.14
CPNE1-216ENST00000437340 ZNHIT6Q9NWK9 470 aaKnown RBP28.39■■■□□ 2.14
CPNE1-216ENST00000437340 PARP14Q460N5 1801 aa28.39■■■□□ 2.14
CPNE1-216ENST00000437340 PDXKO00764 312 aa28.39■■■□□ 2.13
CPNE1-216ENST00000437340 MRPS9P82933 396 aaKnown RBP28.39■■■□□ 2.13
CPNE1-216ENST00000437340 CDK17Q00537 523 aa28.39■■■□□ 2.13
CPNE1-216ENST00000437340 XRRA1Q6P2D8 792 aa28.39■■■□□ 2.13
CPNE1-216ENST00000437340 RNF207Q6ZRF8 634 aa28.39■■■□□ 2.13
CPNE1-216ENST00000437340 ERO1AQ96HE7 468 aa28.39■■■□□ 2.13
CPNE1-216ENST00000437340 MAF1Q9H063 256 aa28.39■■■□□ 2.13
CPNE1-216ENST00000437340 AGPAT5Q9NUQ2 364 aa28.39■■■□□ 2.13
CPNE1-216ENST00000437340 CETN3O15182 167 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 DHX15O43143 795 aaKnown RBP28.38■■■□□ 2.13
CPNE1-216ENST00000437340 KLK7P49862 253 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 CASP5P51878 434 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 HMGCS2P54868 508 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 PGM5Q15124 567 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 WDR59Q6PJI9 974 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 TSC1Q92574 1164 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 TAAR1Q96RJ0 339 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 CHP1Q99653 195 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 LXNQ9BS40 222 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 EDEM3Q9BZQ6 932 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 TBC1D22BQ9NU19 505 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 SEL1LQ9UBV2 794 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 FAM184BQ9ULE4 1060 aa28.38■■■□□ 2.13
CPNE1-216ENST00000437340 EPN1Q9Y6I3 576 aaPredicted RBP28.38■■■□□ 2.13
CPNE1-216ENST00000437340 CASQ1P31415 396 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 ADAM9Q13443 819 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 COG2Q14746 738 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 MTERF4Q7Z6M4 381 aaKnown RBP28.37■■■□□ 2.13
CPNE1-216ENST00000437340 TRIM59Q8IWR1 403 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 ODF2LQ9ULJ1 636 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 RSPH10B2B2RC85 870 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 ATP2A1O14983 1001 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 EIF3DO15371 548 aaKnown RBP eCLIP28.37■■■□□ 2.13
CPNE1-216ENST00000437340 CALUO43852 315 aaPredicted RBP28.37■■■□□ 2.13
CPNE1-216ENST00000437340 FAM13AO94988 1023 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 NDUFA10O95299 355 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 RSPH10BP0C881 870 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 MTMR1Q13613 665 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 MIER3Q7Z3K6 550 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 PXMP2Q9NR77 195 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 RNF146Q9NTX7 359 aa28.37■■■□□ 2.13
CPNE1-216ENST00000437340 HNRNPH3P31942 346 aaKnown RBP28.36■■■□□ 2.13
CPNE1-216ENST00000437340 ZNF131P52739 623 aa28.36■■■□□ 2.13
CPNE1-216ENST00000437340 RMDN3Q96TC7 470 aa28.36■■■□□ 2.13
CPNE1-216ENST00000437340 PDCD2LQ9BRP1 358 aa28.36■■■□□ 2.13
CPNE1-216ENST00000437340 RRAGCQ9HB90 399 aa28.36■■■□□ 2.13
CPNE1-216ENST00000437340 TMOD4Q9NZQ9 345 aa28.36■■■□□ 2.13
CPNE1-216ENST00000437340 WRAP73Q9P2S5 460 aaPredicted RBP28.36■■■□□ 2.13
CPNE1-216ENST00000437340 ZNF215Q9UL58 517 aaPredicted RBP28.36■■■□□ 2.13
CPNE1-216ENST00000437340 FANCGO15287 622 aa28.35■■■□□ 2.13
CPNE1-216ENST00000437340 KIF5CO60282 957 aa28.35■■■□□ 2.13
CPNE1-216ENST00000437340 P4HBP07237 508 aaKnown RBP28.35■■■□□ 2.13
CPNE1-216ENST00000437340 EIF2AK2P19525 551 aaKnown RBP28.35■■■□□ 2.13
CPNE1-216ENST00000437340 CATSPERGQ6ZRH7 1159 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms