RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 SYKP43405 635 aa26.01■■□□□ 1.75
SMARCAL1-208ENST00000434435 NDUFA8P51970 172 aa26.01■■□□□ 1.75
SMARCAL1-208ENST00000434435 BRDTQ58F21 947 aaPredicted RBP26.01■■□□□ 1.75
SMARCAL1-208ENST00000434435 FAM160B1Q5W0V3 765 aa26.01■■□□□ 1.75
SMARCAL1-208ENST00000434435 POTEBQ6S5H4 581 aa26.01■■□□□ 1.75
SMARCAL1-208ENST00000434435 CATSPER3Q86XQ3 398 aa26.01■■□□□ 1.75
SMARCAL1-208ENST00000434435 ATP6V0A1Q93050 837 aa26.01■■□□□ 1.75
SMARCAL1-208ENST00000434435 HSD17B14Q9BPX1 270 aa26.01■■□□□ 1.75
SMARCAL1-208ENST00000434435 LXNQ9BS40 222 aa26.01■■□□□ 1.75
SMARCAL1-208ENST00000434435 HTTP42858 3142 aa26.01■■□□□ 1.75
SMARCAL1-208ENST00000434435 KAT6AQ92794 2004 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 EMSYQ7Z589 1322 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 SYNRGQ9UMZ2 1314 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 IGSF9BQ9UPX0 1349 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 SPATA31C1P0DKV0 1188 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 LIG1P18858 919 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 QARSP47897 775 aaKnown RBP26■■□□□ 1.75
SMARCAL1-208ENST00000434435 CPT1AP50416 773 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 GJA9P57773 515 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 FAM160A1Q05DH4 1040 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 GRB10Q13322 594 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 CTTNQ14247 550 aaKnown RBP26■■□□□ 1.75
SMARCAL1-208ENST00000434435 CCDC60Q8IWA6 550 aaPredicted RBP26■■□□□ 1.75
SMARCAL1-208ENST00000434435 PDILTQ8N807 584 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 BANK1Q8NDB2 785 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 PNMA5Q96PV4 448 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 XRN2Q9H0D6 950 aaKnown RBP eCLIP26■■□□□ 1.75
SMARCAL1-208ENST00000434435 UPF3AQ9H1J1 476 aaKnown RBP26■■□□□ 1.75
SMARCAL1-208ENST00000434435 AZI2Q9H6S1 392 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 ZNF302Q9NR11 478 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 GABBR1Q9UBS5 961 aa26■■□□□ 1.75
SMARCAL1-208ENST00000434435 IGKV6D-21A0A0A0MT36 114 aa25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 POLR2DO15514 142 aaKnown RBP25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 SLITRK3O94933 977 aa25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 PLCG1P19174 1290 aa25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 PSMC5P62195 406 aa25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 TMEM119Q4V9L6 283 aa25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 RRAGBQ5VZM2 374 aa25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 SWSAP1Q6NVH7 229 aa25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 TPH2Q8IWU9 490 aa25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 ZSWIM4Q9H7M6 989 aa25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 XPNPEP3Q9NQH7 507 aa25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 DDX19AQ9NUU7 478 aaKnown RBP25.99■■□□□ 1.75
SMARCAL1-208ENST00000434435 A0A087X0B3 334 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 POTEFA5A3E0 1075 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 A6NJR5 290 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 LGR5O75473 907 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 C6orf222P0C671 652 aaPredicted RBP25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 HOXD8P13378 290 aaPredicted RBP25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 STAT6P42226 847 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 UGCGQ16739 394 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 DGKDQ16760 1214 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 UTP14CQ5TAP6 766 aaKnown RBP25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 POTEGQ6S5H5 508 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 KCTD17Q8N5Z5 321 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 AFAP1L1Q8TED9 768 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 DHX58Q96C10 678 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 PLIN2Q99541 437 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 PANK2Q9BZ23 570 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 KIAA1024Q9UPX6 916 aa25.98■■□□□ 1.75
SMARCAL1-208ENST00000434435 PPFIA4O75335 1185 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 LGALS2P05162 132 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 NKX3-2P78367 333 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 ECM1Q16610 540 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 FSCN1Q16658 493 aaKnown RBP25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 PDXDC2PQ6P474 469 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 FMR1NBQ8N0W7 255 aaPredicted RBP25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 IQUBQ8NA54 791 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 ENGASEQ8NFI3 743 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 GPT2Q8TD30 523 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 PCYT2Q99447 389 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 UNC93B1Q9H1C4 597 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 STK17AQ9UEE5 414 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 USP25Q9UHP3 1055 aa25.97■■□□□ 1.75
SMARCAL1-208ENST00000434435 NR1I2O75469 434 aa25.96■■□□□ 1.75
SMARCAL1-208ENST00000434435 LYPLA2O95372 231 aa25.96■■□□□ 1.75
SMARCAL1-208ENST00000434435 PGK1P00558 417 aa25.96■■□□□ 1.75
SMARCAL1-208ENST00000434435 STAT5BP51692 787 aa25.96■■□□□ 1.75
SMARCAL1-208ENST00000434435 C4orf19Q8IY42 314 aa25.96■■□□□ 1.75
SMARCAL1-208ENST00000434435 GLG1Q92896 1179 aa25.96■■□□□ 1.75
SMARCAL1-208ENST00000434435 SMARCAD1Q9H4L7 1026 aa25.96■■□□□ 1.75
SMARCAL1-208ENST00000434435 WRAP73Q9P2S5 460 aaPredicted RBP25.96■■□□□ 1.75
SMARCAL1-208ENST00000434435 MAFBQ9Y5Q3 323 aaPredicted RBP25.96■■□□□ 1.75
SMARCAL1-208ENST00000434435 KINO60870 393 aaKnown RBP25.95■■□□□ 1.74
SMARCAL1-208ENST00000434435 ADAMTS4O75173 837 aa25.95■■□□□ 1.74
SMARCAL1-208ENST00000434435 ZNF202O95125 648 aa25.95■■□□□ 1.74
SMARCAL1-208ENST00000434435 CCL5P13501 91 aa25.95■■□□□ 1.74
SMARCAL1-208ENST00000434435 BEX3Q00994 111 aa25.95■■□□□ 1.74
SMARCAL1-208ENST00000434435 PRKCEQ02156 737 aa25.95■■□□□ 1.74
SMARCAL1-208ENST00000434435 E2F4Q16254 413 aa25.95■■□□□ 1.74
SMARCAL1-208ENST00000434435 PLPPR4Q7Z2D5 763 aa25.95■■□□□ 1.74
SMARCAL1-208ENST00000434435 TRIM50Q86XT4 487 aa25.95■■□□□ 1.74
SMARCAL1-208ENST00000434435 ARMC5Q96C12 935 aa25.95■■□□□ 1.74
SMARCAL1-208ENST00000434435 CUEDC2Q9H467 287 aa25.95■■□□□ 1.74
SMARCAL1-208ENST00000434435 CTAGE5O15320 804 aa25.94■■□□□ 1.74
SMARCAL1-208ENST00000434435 ZEB2O60315 1214 aa25.94■■□□□ 1.74
SMARCAL1-208ENST00000434435 SLC26A2P50443 739 aa25.94■■□□□ 1.74
SMARCAL1-208ENST00000434435 IRX5P78411 483 aaPredicted RBP25.94■■□□□ 1.74
SMARCAL1-208ENST00000434435 SNW1Q13573 536 aaKnown RBP25.94■■□□□ 1.74
SMARCAL1-208ENST00000434435 MTFR1Q15390 333 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms