RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 DPP9Q86TI2 863 aa20.38■□□□□ 0.85
HMGN1-206ENST00000431390 STAMQ92783 540 aa20.38■□□□□ 0.85
HMGN1-206ENST00000431390 DOCK5Q9H7D0 1870 aa20.38■□□□□ 0.85
HMGN1-206ENST00000431390 WDR64B1ANS9 1081 aa20.38■□□□□ 0.85
HMGN1-206ENST00000431390 SLITRK3O94933 977 aa20.38■□□□□ 0.85
HMGN1-206ENST00000431390 HOXD10P28358 340 aa20.38■□□□□ 0.85
HMGN1-206ENST00000431390 MAMDC4Q6UXC1 1216 aa20.38■□□□□ 0.85
HMGN1-206ENST00000431390 SEPT14Q6ZU15 432 aa20.38■□□□□ 0.85
HMGN1-206ENST00000431390 SMAP1Q8IYB5 467 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-206ENST00000431390 GIMAP8Q8ND71 665 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-206ENST00000431390 DYDC2Q96IM9 177 aa20.38■□□□□ 0.85
HMGN1-206ENST00000431390 C7orf25Q9BPX7 421 aa20.38■□□□□ 0.85
HMGN1-206ENST00000431390 WDR81Q562E7 1941 aa20.37■□□□□ 0.85
HMGN1-206ENST00000431390 P4HBP07237 508 aaKnown RBP20.37■□□□□ 0.85
HMGN1-206ENST00000431390 CUL4BQ13620 913 aa20.37■□□□□ 0.85
HMGN1-206ENST00000431390 MCM6Q14566 821 aa20.37■□□□□ 0.85
HMGN1-206ENST00000431390 MORN1Q5T089 497 aa20.37■□□□□ 0.85
HMGN1-206ENST00000431390 POTEGQ6S5H5 508 aa20.37■□□□□ 0.85
HMGN1-206ENST00000431390 ARMCX2Q7L311 632 aa20.37■□□□□ 0.85
HMGN1-206ENST00000431390 MSL3Q8N5Y2 521 aaKnown RBP20.37■□□□□ 0.85
HMGN1-206ENST00000431390 JPH1Q9HDC5 661 aaPredicted RBP20.37■□□□□ 0.85
HMGN1-206ENST00000431390 RGL1Q9NZL6 768 aa20.37■□□□□ 0.85
HMGN1-206ENST00000431390 MAN1B1Q9UKM7 699 aa20.37■□□□□ 0.85
HMGN1-206ENST00000431390 DNM3Q9UQ16 869 aa20.37■□□□□ 0.85
HMGN1-206ENST00000431390 CCNE2O96020 404 aa20.36■□□□□ 0.85
HMGN1-206ENST00000431390 CCL5P13501 91 aa20.36■□□□□ 0.85
HMGN1-206ENST00000431390 CYP4A11Q02928 519 aa20.36■□□□□ 0.85
HMGN1-206ENST00000431390 NEDD9Q14511 834 aa20.36■□□□□ 0.85
HMGN1-206ENST00000431390 ANO6Q4KMQ2 910 aa20.36■□□□□ 0.85
HMGN1-206ENST00000431390 CNNM4Q6P4Q7 775 aa20.36■□□□□ 0.85
HMGN1-206ENST00000431390 TRIM9Q9C026 710 aa20.36■□□□□ 0.85
HMGN1-206ENST00000431390 RBSNQ9H1K0 784 aa20.36■□□□□ 0.85
HMGN1-206ENST00000431390 BLZF1Q9H2G9 400 aa20.36■□□□□ 0.85
HMGN1-206ENST00000431390 SLC9A2Q9UBY0 812 aa20.36■□□□□ 0.85
HMGN1-206ENST00000431390 DOCK3Q8IZD9 2030 aa20.36■□□□□ 0.85
HMGN1-206ENST00000431390 E9PMD0 336 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 BIN1O00499 593 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 CASP1P29466 404 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 GJA8P48165 433 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 PRKCZQ05513 592 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 MAP2K5Q13163 448 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 MORC3Q14149 939 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 CTTNQ14247 550 aaKnown RBP20.35■□□□□ 0.85
HMGN1-206ENST00000431390 TPH2Q8IWU9 490 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 MAML3Q96JK9 1138 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 RNF208Q9H0X6 261 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 VTA1Q9NP79 307 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 RMND1Q9NWS8 449 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 SAMM50Q9Y512 469 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 SYNGAP1Q96PV0 1343 aa20.35■□□□□ 0.85
HMGN1-206ENST00000431390 GJB1P08034 283 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 HOXC6P09630 235 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 PLA2G4BP0C869 781 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 UBA1P22314 1058 aaKnown RBP20.34■□□□□ 0.85
HMGN1-206ENST00000431390 SP2Q02086 613 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 FAM200AQ8TCP9 573 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 SOCS4Q8WXH5 440 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 NACC1Q96RE7 527 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 LXNQ9BS40 222 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 DNAJC25Q9H1X3 360 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 PCDHA10Q9Y5I2 948 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 SZT2Q5T011 3432 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 LYPLA2O95372 231 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 EYA4O95677 639 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 RPN1P04843 607 aaKnown RBP20.34■□□□□ 0.85
HMGN1-206ENST00000431390 QARSP47897 775 aaKnown RBP20.34■□□□□ 0.85
HMGN1-206ENST00000431390 MRE11P49959 708 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 KCNB1Q14721 858 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 EEPD1Q7L9B9 569 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 UBE2Q1Q7Z7E8 422 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 FBXO16Q8IX29 292 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-206ENST00000431390 SYT2Q8N9I0 419 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-206ENST00000431390 USP6NLQ92738 828 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 NAT10Q9H0A0 1025 aaKnown RBP20.34■□□□□ 0.85
HMGN1-206ENST00000431390 ZSWIM4Q9H7M6 989 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 GRPEL1Q9HAV7 217 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-206ENST00000431390 DDX41Q9UJV9 622 aaKnown RBP20.34■□□□□ 0.85
HMGN1-206ENST00000431390 GABRQQ9UN88 632 aa20.34■□□□□ 0.85
HMGN1-206ENST00000431390 SLC12A3P55017 1021 aa20.33■□□□□ 0.84
HMGN1-206ENST00000431390 FCGRTP55899 365 aa20.33■□□□□ 0.84
HMGN1-206ENST00000431390 PSMC6P62333 389 aa20.33■□□□□ 0.84
HMGN1-206ENST00000431390 DHX8Q14562 1220 aaKnown RBP20.33■□□□□ 0.84
HMGN1-206ENST00000431390 DPCR1Q3MIW9 517 aa20.33■□□□□ 0.84
HMGN1-206ENST00000431390 BANK1Q8NDB2 785 aa20.33■□□□□ 0.84
HMGN1-206ENST00000431390 NPLOC4Q8TAT6 608 aa20.33■□□□□ 0.84
HMGN1-206ENST00000431390 SCFD2Q8WU76 684 aa20.33■□□□□ 0.84
HMGN1-206ENST00000431390 CCDC47Q96A33 483 aaKnown RBP20.33■□□□□ 0.84
HMGN1-206ENST00000431390 TINF2Q9BSI4 451 aa20.33■□□□□ 0.84
HMGN1-206ENST00000431390 A0A087WWV3 80 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 MYMKA6NI61 221 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 TNPO2O14787 897 aaKnown RBP20.32■□□□□ 0.84
HMGN1-206ENST00000431390 KLRC4O43908 158 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 DKC1O60832 514 aaKnown RBP eCLIP20.32■□□□□ 0.84
HMGN1-206ENST00000431390 FARP2O94887 1054 aaPredicted RBP20.32■□□□□ 0.84
HMGN1-206ENST00000431390 PSAPP07602 524 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 ZNF165P49910 485 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 ACTR2P61160 394 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 PSMC5P62195 406 aa20.32■□□□□ 0.84
HMGN1-206ENST00000431390 IRF5Q13568 498 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms