RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 FOSBP53539 338 aa17.29■□□□□ 0.36
PTCD1-204ENST00000430982 GALNT17Q6IS24 598 aa17.29■□□□□ 0.36
PTCD1-204ENST00000430982 PLA2G4DQ86XP0 818 aa17.29■□□□□ 0.36
PTCD1-204ENST00000430982 DAGLBQ8NCG7 672 aa17.29■□□□□ 0.36
PTCD1-204ENST00000430982 KAT2BQ92831 832 aa17.29■□□□□ 0.36
PTCD1-204ENST00000430982 SH2B1Q9NRF2 756 aaPredicted RBP17.29■□□□□ 0.36
PTCD1-204ENST00000430982 KCNH7Q9NS40 1196 aa17.29■□□□□ 0.36
PTCD1-204ENST00000430982 GJB4Q9NTQ9 266 aa17.29■□□□□ 0.36
PTCD1-204ENST00000430982 TRMT13Q9NUP7 481 aaKnown RBP17.29■□□□□ 0.36
PTCD1-204ENST00000430982 PITPNM1O00562 1244 aa17.28■□□□□ 0.36
PTCD1-204ENST00000430982 CYP3A4P08684 503 aa17.28■□□□□ 0.36
PTCD1-204ENST00000430982 CYP2C9P11712 490 aa17.28■□□□□ 0.36
PTCD1-204ENST00000430982 HOXD8P13378 290 aaPredicted RBP17.28■□□□□ 0.36
PTCD1-204ENST00000430982 UTP14CQ5TAP6 766 aaKnown RBP17.28■□□□□ 0.36
PTCD1-204ENST00000430982 HERC6Q8IVU3 1022 aa17.28■□□□□ 0.36
PTCD1-204ENST00000430982 ARNTL2Q8WYA1 636 aa17.28■□□□□ 0.36
PTCD1-204ENST00000430982 GPR20Q99678 358 aa17.28■□□□□ 0.36
PTCD1-204ENST00000430982 PHF20Q9BVI0 1012 aa17.28■□□□□ 0.36
PTCD1-204ENST00000430982 KATNAL1Q9BW62 490 aa17.28■□□□□ 0.36
PTCD1-204ENST00000430982 LMCD1Q9NZU5 365 aa17.28■□□□□ 0.36
PTCD1-204ENST00000430982 TELO2Q9Y4R8 837 aa17.28■□□□□ 0.36
PTCD1-204ENST00000430982 PRR33A8MZF0 331 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 FAM86B1E9PN63 330 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 MEIS1O00470 390 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 LGALS2P05162 132 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 FAM86B2P0C5J1 330 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 ACTN1P12814 892 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 MFSD10Q14728 455 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 NPY5RQ15761 445 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 NFRKBQ6P4R8 1299 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 NIPA1Q7RTP0 329 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 SPRED2Q7Z698 418 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 DEFB128Q7Z7B8 93 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 ALYREFQ86V81 257 aaKnown RBP17.27■□□□□ 0.36
PTCD1-204ENST00000430982 CRYGNQ8WXF5 182 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 UIMC1Q96RL1 719 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 SDF4Q9BRK5 362 aa17.27■□□□□ 0.36
PTCD1-204ENST00000430982 AGO4Q9HCK5 861 aaKnown RBP17.27■□□□□ 0.36
PTCD1-204ENST00000430982 TET1Q8NFU7 2136 aa17.27■□□□□ 0.35
PTCD1-204ENST00000430982 F2P00734 622 aa17.26■□□□□ 0.35
PTCD1-204ENST00000430982 PTPN11Q06124 597 aaPredicted RBP17.26■□□□□ 0.35
PTCD1-204ENST00000430982 KIAA0753Q2KHM9 967 aa17.26■□□□□ 0.35
PTCD1-204ENST00000430982 PRR16Q569H4 304 aa17.26■□□□□ 0.35
PTCD1-204ENST00000430982 TBCKQ8TEA7 893 aa17.26■□□□□ 0.35
PTCD1-204ENST00000430982 JPH1Q9HDC5 661 aaPredicted RBP17.26■□□□□ 0.35
PTCD1-204ENST00000430982 NOD1Q9Y239 953 aa17.26■□□□□ 0.35
PTCD1-204ENST00000430982 CCDC194A0A1B0GVG4 234 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 M0R2N6 131 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 DDX39AO00148 427 aaKnown RBP17.25■□□□□ 0.35
PTCD1-204ENST00000430982 BAIAP3O94812 1187 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 IQCF3P0C7M6 154 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 SETQ01105 290 aaPredicted RBP17.25■□□□□ 0.35
PTCD1-204ENST00000430982 ITGB3BPQ13352 177 aaPredicted RBP17.25■□□□□ 0.35
PTCD1-204ENST00000430982 TRIM29Q14134 588 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 NONOQ15233 471 aaKnown RBP eCLIP17.25■□□□□ 0.353e-7■■■■□ 24.7
PTCD1-204ENST00000430982 KRT25Q7Z3Z0 450 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 TRIM50Q86XT4 487 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 C7orf31Q8N865 590 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 SEPT1Q8WYJ6 367 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 LLPHQ9BRT6 129 aaKnown RBP17.25■□□□□ 0.35
PTCD1-204ENST00000430982 C16orf70Q9BSU1 422 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 BRMS1Q9HCU9 246 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 HDAC6Q9UBN7 1215 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 SLC9A2Q9UBY0 812 aa17.25■□□□□ 0.35
PTCD1-204ENST00000430982 NFASCO94856 1347 aa17.24■□□□□ 0.35
PTCD1-204ENST00000430982 IGLV3-22A0A075B6J6 115 aa17.24■□□□□ 0.35
PTCD1-204ENST00000430982 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.24■□□□□ 0.35
PTCD1-204ENST00000430982 H3BRB1 525 aa17.24■□□□□ 0.35
PTCD1-204ENST00000430982 HAS3O00219 553 aa17.24■□□□□ 0.35
PTCD1-204ENST00000430982 CIITAP33076 1130 aa17.24■□□□□ 0.35
PTCD1-204ENST00000430982 KRT2P35908 639 aa17.24■□□□□ 0.35
PTCD1-204ENST00000430982 TCF7P36402 384 aaPredicted RBP17.24■□□□□ 0.35
PTCD1-204ENST00000430982 USP11P51784 963 aa17.24■□□□□ 0.35
PTCD1-204ENST00000430982 INF2Q27J81 1249 aa17.24■□□□□ 0.35
PTCD1-204ENST00000430982 OXER1Q8TDS5 423 aa17.24■□□□□ 0.35
PTCD1-204ENST00000430982 ZNF577Q9BSK1 485 aa17.24■□□□□ 0.35
PTCD1-204ENST00000430982 TUT1Q9H6E5 874 aaKnown RBP17.24■□□□□ 0.35
PTCD1-204ENST00000430982 ZNF215Q9UL58 517 aaPredicted RBP17.24■□□□□ 0.35
PTCD1-204ENST00000430982 GSTTP1A0A1W2PQM5 241 aa17.23■□□□□ 0.35
PTCD1-204ENST00000430982 KIF28PB7ZC32 967 aa17.23■□□□□ 0.35
PTCD1-204ENST00000430982 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
PTCD1-204ENST00000430982 HMGN5P82970 282 aaKnown RBP17.23■□□□□ 0.35
PTCD1-204ENST00000430982 PTGISQ16647 500 aa17.23■□□□□ 0.35
PTCD1-204ENST00000430982 GDF6Q6KF10 455 aaPredicted RBP17.23■□□□□ 0.35
PTCD1-204ENST00000430982 SESTD1Q86VW0 696 aa17.23■□□□□ 0.35
PTCD1-204ENST00000430982 FAM178BQ8IXR5 827 aa17.23■□□□□ 0.35
PTCD1-204ENST00000430982 FAM184AQ8NB25 1140 aa17.23■□□□□ 0.35
PTCD1-204ENST00000430982 GTF2IRD1Q9UHL9 959 aa17.23■□□□□ 0.35
PTCD1-204ENST00000430982 LCHNA4D1U4 455 aa17.22■□□□□ 0.35
PTCD1-204ENST00000430982 IPO5O00410 1097 aaKnown RBP17.22■□□□□ 0.35
PTCD1-204ENST00000430982 EDIL3O43854 480 aa17.22■□□□□ 0.35
PTCD1-204ENST00000430982 TDP2O95551 362 aa17.22■□□□□ 0.35
PTCD1-204ENST00000430982 MCM2P49736 904 aa17.22■□□□□ 0.35
PTCD1-204ENST00000430982 ACTR2P61160 394 aa17.22■□□□□ 0.35
PTCD1-204ENST00000430982 GUCY1B3Q02153 619 aa17.22■□□□□ 0.35
PTCD1-204ENST00000430982 NR5A1Q13285 461 aa17.22■□□□□ 0.35
PTCD1-204ENST00000430982 GPNMBQ14956 572 aa17.22■□□□□ 0.35
PTCD1-204ENST00000430982 LEXMQ3ZCV2 418 aa17.22■□□□□ 0.35
PTCD1-204ENST00000430982 PIK3AP1Q6ZUJ8 805 aa17.22■□□□□ 0.35
PTCD1-204ENST00000430982 GLG1Q92896 1179 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms