RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 TRMT13Q9NUP7 481 aaKnown RBP28.33■■■□□ 2.13
CPNE1-212ENST00000430570 ERAP1Q9NZ08 941 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 GABBR1Q9UBS5 961 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 PCDHA12Q9UN75 941 aa28.33■■■□□ 2.13
CPNE1-212ENST00000430570 OR52Z1P0C646 297 aa28.32■■■□□ 2.12
CPNE1-212ENST00000430570 SMIM10L2AP0DMW4 78 aa28.32■■■□□ 2.12
CPNE1-212ENST00000430570 SMIM10L2BP0DMW5 78 aa28.32■■■□□ 2.12
CPNE1-212ENST00000430570 ATP4AP20648 1035 aa28.32■■■□□ 2.12
CPNE1-212ENST00000430570 SFNP31947 248 aa28.32■■■□□ 2.12
CPNE1-212ENST00000430570 PTPN11Q06124 597 aaPredicted RBP28.32■■■□□ 2.12
CPNE1-212ENST00000430570 GDF6Q6KF10 455 aaPredicted RBP28.32■■■□□ 2.12
CPNE1-212ENST00000430570 SH3RF1Q7Z6J0 888 aa28.32■■■□□ 2.12
CPNE1-212ENST00000430570 GTF2IRD1Q9UHL9 959 aa28.32■■■□□ 2.12
CPNE1-212ENST00000430570 MROH7Q68CQ1 1323 aa28.32■■■□□ 2.12
CPNE1-212ENST00000430570 DCDC2CA8MYV0 355 aa28.31■■■□□ 2.12
CPNE1-212ENST00000430570 ZNF200P98182 395 aaPredicted RBP28.31■■■□□ 2.12
CPNE1-212ENST00000430570 PLCB4Q15147 1175 aa28.31■■■□□ 2.12
CPNE1-212ENST00000430570 FAM160B1Q5W0V3 765 aa28.31■■■□□ 2.12
CPNE1-212ENST00000430570 RDM1Q8NG50 284 aa28.31■■■□□ 2.12
CPNE1-212ENST00000430570 MAFBQ9Y5Q3 323 aaPredicted RBP28.31■■■□□ 2.12
CPNE1-212ENST00000430570 UGCGQ16739 394 aa28.3■■■□□ 2.12
CPNE1-212ENST00000430570 NCAPH2Q6IBW4 605 aa28.3■■■□□ 2.12
CPNE1-212ENST00000430570 PDXDC2PQ6P474 469 aa28.3■■■□□ 2.12
CPNE1-212ENST00000430570 PDLIM7Q9NR12 457 aa28.3■■■□□ 2.12
CPNE1-212ENST00000430570 WDR81Q562E7 1941 aa28.3■■■□□ 2.12
CPNE1-212ENST00000430570 CLTBP09497 229 aa28.29■■■□□ 2.12
CPNE1-212ENST00000430570 ZSCAN22P10073 491 aaPredicted RBP28.29■■■□□ 2.12
CPNE1-212ENST00000430570 TECP42680 631 aa28.29■■■□□ 2.12
CPNE1-212ENST00000430570 CTAGE1Q96RT6 745 aa28.29■■■□□ 2.12
CPNE1-212ENST00000430570 ZSCAN16Q9H4T2 348 aaPredicted RBP28.29■■■□□ 2.12
CPNE1-212ENST00000430570 SETD4Q9NVD3 440 aa28.29■■■□□ 2.12
CPNE1-212ENST00000430570 ZMYND8Q9ULU4 1186 aaPredicted RBP28.29■■■□□ 2.12
CPNE1-212ENST00000430570 ZNF862O60290 1169 aa28.28■■■□□ 2.12
CPNE1-212ENST00000430570 PDIA4P13667 645 aaKnown RBP28.28■■■□□ 2.12
CPNE1-212ENST00000430570 SYN1P17600 705 aa28.28■■■□□ 2.12
CPNE1-212ENST00000430570 EPHA7Q15375 998 aa28.28■■■□□ 2.12
CPNE1-212ENST00000430570 FTOQ9C0B1 505 aaKnown RBP eCLIP28.28■■■□□ 2.125e-10■□□□□ 9.7
CPNE1-212ENST00000430570 DNAH12Q6ZR08 3092 aa28.28■■■□□ 2.12
CPNE1-212ENST00000430570 IGSF9BQ9UPX0 1349 aa28.28■■■□□ 2.12
CPNE1-212ENST00000430570 TRIM43BA6NCK2 446 aa28.27■■■□□ 2.12
CPNE1-212ENST00000430570 POTEMA6NI47 508 aa28.27■■■□□ 2.12
CPNE1-212ENST00000430570 TLR3O15455 904 aaKnown RBP28.27■■■□□ 2.12
CPNE1-212ENST00000430570 HOXC8P31273 242 aa28.27■■■□□ 2.12
CPNE1-212ENST00000430570 IL17AQ16552 155 aa28.27■■■□□ 2.12
CPNE1-212ENST00000430570 PTGISQ16647 500 aa28.27■■■□□ 2.12
CPNE1-212ENST00000430570 TRMT1LQ7Z2T5 733 aaKnown RBP28.27■■■□□ 2.12
CPNE1-212ENST00000430570 BANK1Q8NDB2 785 aa28.27■■■□□ 2.12
CPNE1-212ENST00000430570 TRIM43Q96BQ3 446 aaPredicted RBP28.27■■■□□ 2.12
CPNE1-212ENST00000430570 PRDM5Q9NQX1 630 aaPredicted RBP28.27■■■□□ 2.12
CPNE1-212ENST00000430570 TMEM39AQ9NV64 488 aa28.27■■■□□ 2.12
CPNE1-212ENST00000430570 ZDHHC9Q9Y397 364 aa28.27■■■□□ 2.12
CPNE1-212ENST00000430570 MYH9P35579 1960 aaKnown RBP28.27■■■□□ 2.12
CPNE1-212ENST00000430570 TRIP12Q14669 1992 aaPredicted RBP28.27■■■□□ 2.12
CPNE1-212ENST00000430570 POTEB3A0JP26 581 aa28.26■■■□□ 2.11
CPNE1-212ENST00000430570 C17orf102A2RUQ5 167 aa28.26■■■□□ 2.11
CPNE1-212ENST00000430570 F13A1P00488 732 aa28.26■■■□□ 2.11
CPNE1-212ENST00000430570 CYP2C9P11712 490 aa28.26■■■□□ 2.11
CPNE1-212ENST00000430570 SLC26A2P50443 739 aa28.26■■■□□ 2.11
CPNE1-212ENST00000430570 ATP2C1P98194 919 aaPredicted RBP28.26■■■□□ 2.11
CPNE1-212ENST00000430570 SF3A1Q15459 793 aaKnown RBP28.26■■■□□ 2.11
CPNE1-212ENST00000430570 POTEBQ6S5H4 581 aa28.26■■■□□ 2.11
CPNE1-212ENST00000430570 RGL1Q9NZL6 768 aa28.26■■■□□ 2.11
CPNE1-212ENST00000430570 TBX21Q9UL17 535 aa28.26■■■□□ 2.11
CPNE1-212ENST00000430570 TRPC6Q9Y210 931 aa28.26■■■□□ 2.11
CPNE1-212ENST00000430570 NR2E3Q9Y5X4 410 aa28.26■■■□□ 2.11
CPNE1-212ENST00000430570 CLIC4Q9Y696 253 aa28.26■■■□□ 2.11
CPNE1-212ENST00000430570 INSRRP14616 1297 aa28.25■■■□□ 2.11
CPNE1-212ENST00000430570 ADAM17P78536 824 aa28.25■■■□□ 2.11
CPNE1-212ENST00000430570 PPFIA1Q13136 1202 aa28.25■■■□□ 2.11
CPNE1-212ENST00000430570 CKAP2LQ8IYA6 745 aa28.25■■■□□ 2.11
CPNE1-212ENST00000430570 ATP8B4Q8TF62 1192 aa28.25■■■□□ 2.11
CPNE1-212ENST00000430570 DYDC2Q96IM9 177 aa28.25■■■□□ 2.11
CPNE1-212ENST00000430570 WRAP73Q9P2S5 460 aaPredicted RBP28.25■■■□□ 2.11
CPNE1-212ENST00000430570 LAD1O00515 517 aa28.24■■■□□ 2.11
CPNE1-212ENST00000430570 TREHO43280 583 aa28.24■■■□□ 2.11
CPNE1-212ENST00000430570 STBD1O95210 358 aa28.24■■■□□ 2.11
CPNE1-212ENST00000430570 ITGB8P26012 769 aa28.24■■■□□ 2.11
CPNE1-212ENST00000430570 GRIK4Q16099 956 aa28.24■■■□□ 2.11
CPNE1-212ENST00000430570 LMBR1Q8WVP7 490 aa28.24■■■□□ 2.11
CPNE1-212ENST00000430570 EIF2AK1Q9BQI3 630 aaKnown RBP28.24■■■□□ 2.11
CPNE1-212ENST00000430570 H0YGN5 161 aa28.23■■■□□ 2.11
CPNE1-212ENST00000430570 KIAA0355O15063 1070 aa28.23■■■□□ 2.11
CPNE1-212ENST00000430570 HBP1O60381 514 aa28.23■■■□□ 2.11
CPNE1-212ENST00000430570 BRD1O95696 1058 aa28.23■■■□□ 2.11
CPNE1-212ENST00000430570 P4HBP07237 508 aaKnown RBP28.23■■■□□ 2.11
CPNE1-212ENST00000430570 FXR2P51116 673 aaKnown RBP eCLIP28.23■■■□□ 2.112e-6■■■□□ 18.4
CPNE1-212ENST00000430570 IGBP1P78318 339 aa28.23■■■□□ 2.11
CPNE1-212ENST00000430570 CTTNQ14247 550 aaKnown RBP28.23■■■□□ 2.11
CPNE1-212ENST00000430570 TRAPPC12Q8WVT3 735 aa28.23■■■□□ 2.11
CPNE1-212ENST00000430570 ATP6V0A1Q93050 837 aa28.23■■■□□ 2.11
CPNE1-212ENST00000430570 ZBTB10Q96DT7 871 aa28.23■■■□□ 2.11
CPNE1-212ENST00000430570 USP28Q96RU2 1077 aa28.23■■■□□ 2.11
CPNE1-212ENST00000430570 NRCAMQ92823 1304 aa28.23■■■□□ 2.11
CPNE1-212ENST00000430570 SLITRK3O94933 977 aa28.22■■■□□ 2.11
CPNE1-212ENST00000430570 ANP32AP39687 249 aaKnown RBP28.22■■■□□ 2.11
CPNE1-212ENST00000430570 PRPHP41219 470 aa28.22■■■□□ 2.11
CPNE1-212ENST00000430570 QARSP47897 775 aaKnown RBP28.22■■■□□ 2.11
CPNE1-212ENST00000430570 PSMC5P62195 406 aa28.22■■■□□ 2.11
CPNE1-212ENST00000430570 PRKCEQ02156 737 aa28.22■■■□□ 2.11
CPNE1-212ENST00000430570 CYP4A11Q02928 519 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms