RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 CCND1P24385 295 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 SLCO1A2P46721 670 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 CTSWP56202 376 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 KLHL30Q0D2K2 578 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 TAF11Q15544 211 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 CCDC38Q502W7 563 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 ARMC3Q5W041 872 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 KRT28Q7Z3Y7 464 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 KLHL29Q96CT2 875 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 PLA2G12BQ9BX93 195 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 LUC7LQ9NQ29 371 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 NR2E1Q9Y466 385 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 BCORQ6W2J9 1755 aa12.09□□□□□ -0.47
SEMA4D-209ENST00000429836 BHMG1C9JSJ3 638 aaPredicted RBP12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 USP11P51784 963 aa12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 DYNLL1P63167 89 aaKnown RBP12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 LRRC14Q15048 493 aa12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 LRRC55Q6ZSA7 311 aa12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 MGARPQ8TDB4 240 aa12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 EPB41L4BQ9H329 900 aa12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 ADAM22Q9P0K1 906 aa12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 ZFATQ9P243 1243 aa12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 ABCF2Q9UG63 623 aa12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 MTMR7Q9Y216 660 aa12.08□□□□□ -0.47
SEMA4D-209ENST00000429836 A6NHS1 94 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 ATP4AP20648 1035 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 MMP13P45452 471 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 CTCFP49711 727 aaPredicted RBP12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 ACTRT1Q8TDG2 376 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 FMO2Q99518 471 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 TCP11L1Q9NUJ3 509 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 CEP72Q9P209 647 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 PCDHA4Q9UN74 947 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 DPPA5A6NC42 116 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 DDAH1O94760 285 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 CALM1P0DP23 149 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 CALM2P0DP24 149 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 CALM3P0DP25 149 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 ATP2A2P16615 1042 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 TECP42680 631 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 TUBP50607 506 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 SEMA3FQ13275 785 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 SLC4A8Q2Y0W8 1093 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 GRIPAP1Q4V328 841 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 SLC17A8Q8NDX2 589 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 ATP8B4Q8TF62 1192 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 PBKQ96KB5 322 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 IRAK4Q9NWZ3 460 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 PCDHA6Q9UN73 950 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 PCDHA8Q9Y5H6 950 aa12.08□□□□□ -0.48
SEMA4D-209ENST00000429836 BAZ2AQ9UIF9 1905 aaKnown RBP12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 MYMKA6NI61 221 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 IRS4O14654 1257 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 GNAT1P11488 350 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 FGFR2P21802 821 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 RPS6KA3P51812 740 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 SLMAPQ14BN4 828 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 DAAM2Q86T65 1068 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 RNF25Q96BH1 459 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 ZCWPW1Q9H0M4 648 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 PIDD1Q9HB75 910 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 UTP11Q9Y3A2 253 aaKnown RBP12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 SPDYE5A6NIY4 337 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 SPDYE3A6NKU9 549 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 RGS16O15492 202 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 PPFIA2O75334 1257 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 CALML3P27482 149 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 MSH2P43246 934 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 SLC30A9Q6PML9 568 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 HOOK3Q86VS8 718 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 MLXIPLQ9NP71 852 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 FGFR1OP2Q9NVK5 253 aa12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 NKX1-2Q9UD57 310 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-209ENST00000429836 MAGEB6P1A0A0J9YX57 407 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 SNX3O60493 162 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 PDHA1P08559 390 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 SLC5A1P13866 664 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 LRRC57Q8N9N7 239 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 EPS8L3Q8TE67 593 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 NAF1Q96HR8 494 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 SMIM24O75264 130 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 ZBTB48P10074 688 aaPredicted RBP12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 COPS2P61201 443 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 PTK2Q05397 1052 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 SLC29A2Q14542 456 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 ASIC2Q16515 512 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 IFI16Q16666 785 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 LETM2Q2VYF4 491 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 PEX26Q7Z412 305 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 MMTAG2Q9BU76 263 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 TXLNGYQ9BZA5 131 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 ZMYND12Q9H0C1 365 aa12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 ZMYND8Q9ULU4 1186 aaPredicted RBP12.06□□□□□ -0.48
SEMA4D-209ENST00000429836 FESP07332 822 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 NEFHP12036 1026 aa12.05□□□□□ -0.48
SEMA4D-209ENST00000429836 ACTN1P12814 892 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms