RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 HAS1Q92839 578 aa19.74■□□□□ 0.75
CTSD-203ENST00000429746 RIT2Q99578 217 aa19.74■□□□□ 0.75
CTSD-203ENST00000429746 STXBP5LQ9Y2K9 1186 aa19.74■□□□□ 0.75
CTSD-203ENST00000429746 MYO9BQ13459 2157 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 CHD9Q3L8U1 2897 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 PITPNM1O00562 1244 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 TREHO43280 583 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 CCL23P55773 120 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 PPIGQ13427 754 aaKnown RBP eCLIP19.73■□□□□ 0.75
CTSD-203ENST00000429746 PLCB4Q15147 1175 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 LETM2Q2VYF4 491 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 PLPPR4Q7Z2D5 763 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 TMEM199Q8N511 208 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 SCLYQ96I15 445 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 C8orf76Q96K31 380 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 UNC45AQ9H3U1 944 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 SETD4Q9NVD3 440 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 VAV3Q9UKW4 847 aa19.73■□□□□ 0.75
CTSD-203ENST00000429746 MBLAC1A4D2B0 266 aaPredicted RBP19.72■□□□□ 0.75
CTSD-203ENST00000429746 ZBTB42B2RXF5 422 aa19.72■□□□□ 0.75
CTSD-203ENST00000429746 MARK3P27448 753 aa19.72■□□□□ 0.75
CTSD-203ENST00000429746 PTK7Q13308 1070 aa19.72■□□□□ 0.75
CTSD-203ENST00000429746 MBTPS1Q14703 1052 aa19.72■□□□□ 0.75
CTSD-203ENST00000429746 RASIP1Q5U651 963 aa19.72■□□□□ 0.75
CTSD-203ENST00000429746 POTEDQ86YR6 584 aa19.72■□□□□ 0.75
CTSD-203ENST00000429746 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.72■□□□□ 0.75
CTSD-203ENST00000429746 SMARCAD1Q9H4L7 1026 aa19.72■□□□□ 0.75
CTSD-203ENST00000429746 ERAP1Q9NZ08 941 aa19.72■□□□□ 0.75
CTSD-203ENST00000429746 DDX25Q9UHL0 483 aaKnown RBP19.72■□□□□ 0.75
CTSD-203ENST00000429746 ZNF215Q9UL58 517 aaPredicted RBP19.72■□□□□ 0.75
CTSD-203ENST00000429746 MAFBQ9Y5Q3 323 aaPredicted RBP19.72■□□□□ 0.75
CTSD-203ENST00000429746 IGSF9BQ9UPX0 1349 aa19.72■□□□□ 0.75
CTSD-203ENST00000429746 CDH23Q9H251 3354 aa19.72■□□□□ 0.75
CTSD-203ENST00000429746 PTPRSQ13332 1948 aa19.71■□□□□ 0.75
CTSD-203ENST00000429746 TMEM265A0A087WTH1 108 aa19.71■□□□□ 0.75
CTSD-203ENST00000429746 C17orf102A2RUQ5 167 aa19.71■□□□□ 0.75
CTSD-203ENST00000429746 KRT76Q01546 638 aa19.71■□□□□ 0.75
CTSD-203ENST00000429746 SPIRE1Q08AE8 756 aa19.71■□□□□ 0.75
CTSD-203ENST00000429746 TMEM240Q5SV17 173 aa19.71■□□□□ 0.75
CTSD-203ENST00000429746 ZBTB10Q96DT7 871 aa19.71■□□□□ 0.75
CTSD-203ENST00000429746 RNPC3Q96LT9 517 aaKnown RBP19.71■□□□□ 0.75
CTSD-203ENST00000429746 OSBPL7Q9BZF2 842 aa19.71■□□□□ 0.75
CTSD-203ENST00000429746 ZNF862O60290 1169 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 STBD1O95210 358 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 IQCF3P0C7M6 154 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 CKBP12277 381 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 GCFC2P16383 781 aaKnown RBP19.7■□□□□ 0.74
CTSD-203ENST00000429746 U2AF2P26368 475 aaKnown RBP eCLIP19.7■□□□□ 0.74
CTSD-203ENST00000429746 STAT5BP51692 787 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 UGCGQ16739 394 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 TCTN1Q2MV58 587 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 ZNF697Q5TEC3 545 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 LRCH2Q5VUJ6 765 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 RUFY4Q6ZNE9 571 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 Q7L0L9 218 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 SMAP1Q8IYB5 467 aaPredicted RBP19.7■□□□□ 0.74
CTSD-203ENST00000429746 CAGE1Q8TC20 777 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 FOXP1Q9H334 677 aaPredicted RBP19.7■□□□□ 0.74
CTSD-203ENST00000429746 IL23AQ9NPF7 189 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 NRCAMQ92823 1304 aa19.7■□□□□ 0.74
CTSD-203ENST00000429746 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.69■□□□□ 0.74
CTSD-203ENST00000429746 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.69■□□□□ 0.74
CTSD-203ENST00000429746 EML1O00423 815 aa19.69■□□□□ 0.74
CTSD-203ENST00000429746 CCNT1O60563 726 aaKnown RBP19.69■□□□□ 0.74
CTSD-203ENST00000429746 ACRP10323 421 aa19.69■□□□□ 0.74
CTSD-203ENST00000429746 INSRRP14616 1297 aa19.69■□□□□ 0.74
CTSD-203ENST00000429746 GJB2P29033 226 aa19.69■□□□□ 0.74
CTSD-203ENST00000429746 GRIK4Q16099 956 aa19.69■□□□□ 0.74
CTSD-203ENST00000429746 SWSAP1Q6NVH7 229 aa19.69■□□□□ 0.74
CTSD-203ENST00000429746 GLG1Q92896 1179 aa19.69■□□□□ 0.74
CTSD-203ENST00000429746 ATP6V0A1Q93050 837 aa19.69■□□□□ 0.74
CTSD-203ENST00000429746 BRMS1Q9HCU9 246 aa19.69■□□□□ 0.74
CTSD-203ENST00000429746 PCDHA10Q9Y5I2 948 aa19.69■□□□□ 0.74
CTSD-203ENST00000429746 TBX3O15119 743 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 GAS7O60861 476 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 PPFIA1Q13136 1202 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 PPP2R5CQ13362 524 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 TRIM29Q14134 588 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 ZNF618Q5T7W0 954 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 PSRC1Q6PGN9 363 aaPredicted RBP19.68■□□□□ 0.74
CTSD-203ENST00000429746 TRAPPC12Q8WVT3 735 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 FAM20AQ96MK3 541 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 MTMR9Q96QG7 549 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 TEKT3Q9BXF9 490 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 TMEM60Q9H2L4 133 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 ZNF302Q9NR11 478 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 DISC1Q9NRI5 854 aa19.68■□□□□ 0.74
CTSD-203ENST00000429746 COL6A3P12111 3177 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 WDR64B1ANS9 1081 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 NBNO60934 754 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 SLC26A2P50443 739 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 TOB1P50616 345 aaPredicted RBP19.67■□□□□ 0.74
CTSD-203ENST00000429746 BFSP2Q13515 415 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 MIS18BP1Q6P0N0 1132 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 ZNF365Q70YC5 407 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 RPAINQ86UA6 219 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 NOSTRINQ8IVI9 506 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 FAM184AQ8NB25 1140 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 ATP8B4Q8TF62 1192 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 NOD1Q9Y239 953 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms