RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 USP11P51784 963 aa12.13□□□□□ -0.47
HIPK2-203ENST00000428878 TAF1CQ15572 869 aaPredicted RBP12.13□□□□□ -0.47
HIPK2-203ENST00000428878 LY6KQ17RY6 165 aa12.13□□□□□ -0.47
HIPK2-203ENST00000428878 DEPTORQ8TB45 409 aa12.13□□□□□ -0.47
HIPK2-203ENST00000428878 NACC1Q96RE7 527 aa12.13□□□□□ -0.47
HIPK2-203ENST00000428878 MMP19Q99542 508 aa12.13□□□□□ -0.47
HIPK2-203ENST00000428878 MTRQ99707 1265 aa12.13□□□□□ -0.47
HIPK2-203ENST00000428878 GPBP1L1Q9HC44 474 aaPredicted RBP12.13□□□□□ -0.47
HIPK2-203ENST00000428878 ARMCX3Q9UH62 379 aaPredicted RBP12.13□□□□□ -0.47
HIPK2-203ENST00000428878 KIF5CO60282 957 aa12.13□□□□□ -0.47
HIPK2-203ENST00000428878 USP2O75604 605 aaPredicted RBP12.13□□□□□ -0.47
HIPK2-203ENST00000428878 PNMA6AP0CW24 399 aaPredicted RBP12.13□□□□□ -0.47
HIPK2-203ENST00000428878 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.13□□□□□ -0.47
HIPK2-203ENST00000428878 ENOX1Q8TC92 643 aaKnown RBP12.13□□□□□ -0.47
HIPK2-203ENST00000428878 PNMA5Q96PV4 448 aa12.13□□□□□ -0.47
HIPK2-203ENST00000428878 ASCC2Q9H1I8 757 aaPredicted RBP12.13□□□□□ -0.47
HIPK2-203ENST00000428878 KCNF1Q9H3M0 494 aa12.13□□□□□ -0.47
HIPK2-203ENST00000428878 A1CFQ9NQ94 594 aaKnown RBP12.13□□□□□ -0.47
HIPK2-203ENST00000428878 ABCB4P21439 1286 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 MPHOSPH6Q99547 160 aaKnown RBP12.12□□□□□ -0.47
HIPK2-203ENST00000428878 PARVGQ9HBI0 331 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.12□□□□□ -0.477e-7■□□□□ 11.3
HIPK2-203ENST00000428878 HIP1RO75146 1068 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 CASQ1P31415 396 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 TRAPPC12Q8WVT3 735 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 MKL1Q969V6 931 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 KIAA1683Q9H0B3 1180 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 AKT3Q9Y243 479 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 XRCC5P13010 732 aaKnown RBP12.12□□□□□ -0.47
HIPK2-203ENST00000428878 CCNE1P24864 410 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 CLCN1P35523 988 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 HERVK_113P62684 666 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 MRPS25P82663 173 aaKnown RBP12.12□□□□□ -0.47
HIPK2-203ENST00000428878 TKFCQ3LXA3 575 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 NAALADL2Q58DX5 795 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 TCP11X2Q5H9J9 407 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 PRAMEF19Q5SWL8 479 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 FNBP1Q96RU3 617 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 FGFBP2Q9BYJ0 223 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 CCSER1Q9C0I3 900 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 PAXBP1Q9Y5B6 917 aa12.12□□□□□ -0.47
HIPK2-203ENST00000428878 ENC1O14682 589 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 TXNP10599 105 aaKnown RBP12.11□□□□□ -0.47
HIPK2-203ENST00000428878 ITGB5P18084 799 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 CCDC122Q5T0U0 273 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 MXRA8Q9BRK3 442 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 GBA2Q9HCG7 927 aaPredicted RBP12.11□□□□□ -0.47
HIPK2-203ENST00000428878 KMT5AQ9NQR1 393 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 STK17AQ9UEE5 414 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 TUBE1Q9UJT0 475 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 IGKV6D-41A0A0C4DH26 115 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 ZSCAN12O43309 604 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 BUB1O43683 1085 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 QARSP47897 775 aaKnown RBP12.11□□□□□ -0.47
HIPK2-203ENST00000428878 FKBP1AP62942 108 aaKnown RBP12.11□□□□□ -0.47
HIPK2-203ENST00000428878 KCTD19Q17RG1 926 aaPredicted RBP12.11□□□□□ -0.47
HIPK2-203ENST00000428878 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 SESTD1Q86VW0 696 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 THNSL1Q8IYQ7 743 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 TRIML1Q8N9V2 468 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 PDCD2LQ9BRP1 358 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 MRIQ9BWK5 157 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 PPP1R3GB7ZBB8 358 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 LIG4P49917 911 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 ERO1BQ86YB8 467 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 PPM1KQ8N3J5 372 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 SLC7A3Q8WY07 619 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 MRFAP1L1Q96HT8 127 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 SPATA33Q96N06 139 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 ACTN1P12814 892 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 RPL13P26373 211 aaKnown RBP12.11□□□□□ -0.47
HIPK2-203ENST00000428878 YWHABP31946 246 aaKnown RBP12.11□□□□□ -0.47
HIPK2-203ENST00000428878 STRN3Q13033 797 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 NAA30Q147X3 362 aaPredicted RBP12.11□□□□□ -0.47
HIPK2-203ENST00000428878 FAM20AQ96MK3 541 aa12.11□□□□□ -0.47
HIPK2-203ENST00000428878 ADD3Q9UEY8 706 aaKnown RBP12.11□□□□□ -0.47
HIPK2-203ENST00000428878 A0A0U1RQG5 324 aaPredicted RBP12.1□□□□□ -0.47
HIPK2-203ENST00000428878 C19orf81C9J6K1 198 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 ERCC5P28715 1186 aaPredicted RBP12.1□□□□□ -0.47
HIPK2-203ENST00000428878 GCLMP48507 274 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 CASP4P49662 377 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 DMP1Q13316 513 aaPredicted RBP12.1□□□□□ -0.47
HIPK2-203ENST00000428878 TEPSINQ96N21 525 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 MMTAG2Q9BU76 263 aaKnown RBP12.1□□□□□ -0.47
HIPK2-203ENST00000428878 JPH1Q9HDC5 661 aaPredicted RBP12.1□□□□□ -0.47
HIPK2-203ENST00000428878 BLOC1S4Q9NUP1 217 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 ESYT2A0FGR8 921 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 CCDC175P0C221 793 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 SNHG28P0DPA3 235 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 SREBF1P36956 1147 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 FAM193AP78312 1265 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 FSTL1Q12841 308 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 CCDC181Q5TID7 509 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 OTUD6AQ7L8S5 288 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 TAF1DQ9H5J8 278 aaPredicted RBP12.1□□□□□ -0.47
HIPK2-203ENST00000428878 NOD1Q9Y239 953 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 MYO9BQ13459 2157 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 WDR64B1ANS9 1081 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 PDHXO00330 501 aa12.1□□□□□ -0.47
HIPK2-203ENST00000428878 IKBKBO14920 756 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms