RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SFNP31947 248 aa16.39■□□□□ 0.21
SGCE-204ENST00000428696 CDK7P50613 346 aa16.39■□□□□ 0.21
SGCE-204ENST00000428696 RESTQ13127 1097 aa16.39■□□□□ 0.21
SGCE-204ENST00000428696 NFRKBQ6P4R8 1299 aa16.39■□□□□ 0.21
SGCE-204ENST00000428696 CCDC60Q8IWA6 550 aaPredicted RBP16.39■□□□□ 0.21
SGCE-204ENST00000428696 PCYT2Q99447 389 aa16.39■□□□□ 0.21
SGCE-204ENST00000428696 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
SGCE-204ENST00000428696 SETD4Q9NVD3 440 aa16.39■□□□□ 0.21
SGCE-204ENST00000428696 PCDH10Q9P2E7 1040 aa16.39■□□□□ 0.21
SGCE-204ENST00000428696 DOCK5Q9H7D0 1870 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 MROH7Q68CQ1 1323 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 EML1O00423 815 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 B4GALT4O60513 344 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 ATG7O95352 703 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 SMIM10L2AP0DMW4 78 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 SMIM10L2BP0DMW5 78 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 ZSCAN22P10073 491 aaPredicted RBP16.38■□□□□ 0.21
SGCE-204ENST00000428696 ZNF200P98182 395 aaPredicted RBP16.38■□□□□ 0.21
SGCE-204ENST00000428696 PKP1Q13835 747 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 PTGISQ16647 500 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 TMEM266Q2M3C6 531 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 PLPPR4Q7Z2D5 763 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 BANK1Q8NDB2 785 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 MTMR9Q96QG7 549 aa16.38■□□□□ 0.21
SGCE-204ENST00000428696 POTEB3A0JP26 581 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 C17orf102A2RUQ5 167 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 DDX11L8A8MPP1 907 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 LGR5O75473 907 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 CLTBP09497 229 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 CYP2C9P11712 490 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 CYP4A11Q02928 519 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 PPFIA1Q13136 1202 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 GDF6Q6KF10 455 aaPredicted RBP16.37■□□□□ 0.21
SGCE-204ENST00000428696 POTEBQ6S5H4 581 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 DTHD1Q6ZMT9 781 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 TPH2Q8IWU9 490 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 TNPO1Q92973 898 aaKnown RBP16.37■□□□□ 0.21
SGCE-204ENST00000428696 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.37■□□□□ 0.21
SGCE-204ENST00000428696 TFIP11Q9UBB9 837 aaKnown RBP16.37■□□□□ 0.21
SGCE-204ENST00000428696 VAV3Q9UKW4 847 aa16.37■□□□□ 0.21
SGCE-204ENST00000428696 HAS3O00219 553 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 GNAT1P11488 350 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 PDIA4P13667 645 aaKnown RBP16.36■□□□□ 0.21
SGCE-204ENST00000428696 FAAP100Q0VG06 881 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 PPP2R5CQ13362 524 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 ORC2Q13416 577 aaPredicted RBP16.36■□□□□ 0.21
SGCE-204ENST00000428696 SNX17Q15036 470 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 PLCB4Q15147 1175 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 SF3A1Q15459 793 aaKnown RBP16.36■□□□□ 0.21
SGCE-204ENST00000428696 C1orf53Q5VUE5 145 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 ANKRD33Q7Z3H0 272 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 SH3RF1Q7Z6J0 888 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 FAM126BQ8IXS8 530 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 SLC43A3Q8NBI5 491 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 ATP6V0A1Q93050 837 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 SEZ6LQ9BYH1 1024 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 PPP1R12CQ9BZL4 782 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 RGL1Q9NZL6 768 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 CEP131Q9UPN4 1083 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 EMSYQ7Z589 1322 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 POTEMA6NI47 508 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 INSRRP14616 1297 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 RAG1P15918 1043 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 SLC26A2P50443 739 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 PTPN11Q06124 597 aaPredicted RBP16.36■□□□□ 0.21
SGCE-204ENST00000428696 CTTNQ14247 550 aaKnown RBP16.36■□□□□ 0.21
SGCE-204ENST00000428696 EPHA7Q15375 998 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 ZRSR1Q15695 479 aaKnown RBP16.36■□□□□ 0.21
SGCE-204ENST00000428696 UGCGQ16739 394 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 C4orf32Q8N8J7 132 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 RDM1Q8NG50 284 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 DYDC2Q96IM9 177 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 TOX2Q96NM4 488 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 FTOQ9C0B1 505 aaKnown RBP eCLIP16.36■□□□□ 0.21
SGCE-204ENST00000428696 NRBP2Q9NSY0 501 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 GTF2IRD1Q9UHL9 959 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 CLIC4Q9Y696 253 aa16.36■□□□□ 0.21
SGCE-204ENST00000428696 IGKV6D-21A0A0A0MT36 114 aa16.35■□□□□ 0.21
SGCE-204ENST00000428696 H0YGN5 161 aa16.35■□□□□ 0.21
SGCE-204ENST00000428696 F13A1P00488 732 aa16.35■□□□□ 0.21
SGCE-204ENST00000428696 QARSP47897 775 aaKnown RBP16.35■□□□□ 0.21
SGCE-204ENST00000428696 GRIK4Q16099 956 aa16.35■□□□□ 0.21
SGCE-204ENST00000428696 TRAPPC12Q8WVT3 735 aa16.35■□□□□ 0.21
SGCE-204ENST00000428696 ZBTB10Q96DT7 871 aa16.35■□□□□ 0.21
SGCE-204ENST00000428696 ZNF396Q96N95 335 aaPredicted RBP16.35■□□□□ 0.21
SGCE-204ENST00000428696 LBHD1Q9BQE6 289 aaPredicted RBP16.35■□□□□ 0.21
SGCE-204ENST00000428696 EIF2AK1Q9BQI3 630 aaKnown RBP16.35■□□□□ 0.21
SGCE-204ENST00000428696 RAB34Q9BZG1 259 aa16.35■□□□□ 0.21
SGCE-204ENST00000428696 LRWD1Q9UFC0 647 aa16.35■□□□□ 0.21
SGCE-204ENST00000428696 SEPT9Q9UHD8 586 aaPredicted RBP16.35■□□□□ 0.21
SGCE-204ENST00000428696 MAFBQ9Y5Q3 323 aaPredicted RBP16.35■□□□□ 0.21
SGCE-204ENST00000428696 A0A087WWV3 80 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 VWA3AA6NCI4 1184 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 TRIM43BA6NCK2 446 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 LAD1O00515 517 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 TREHO43280 583 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 HBP1O60381 514 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 P4HBP07237 508 aaKnown RBP16.34■□□□□ 0.21
SGCE-204ENST00000428696 NCLP19338 710 aaKnown RBP16.34■□□□□ 0.21
SGCE-204ENST00000428696 ATP4AP20648 1035 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms