RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 ALX1Q15699 326 aa13.4□□□□□ -0.26
DDX39B-209ENST00000428450 CWF19L1Q69YN2 538 aaKnown RBP13.4□□□□□ -0.26
DDX39B-209ENST00000428450 TSHZ1Q6ZSZ6 1077 aa13.4□□□□□ -0.26
DDX39B-209ENST00000428450 NPAS4Q8IUM7 802 aa13.4□□□□□ -0.26
DDX39B-209ENST00000428450 RASGRP4Q8TDF6 673 aa13.4□□□□□ -0.26
DDX39B-209ENST00000428450 GPATCH3Q96I76 525 aa13.4□□□□□ -0.26
DDX39B-209ENST00000428450 GPR20Q99678 358 aa13.4□□□□□ -0.26
DDX39B-209ENST00000428450 APOL5Q9BWW9 433 aa13.4□□□□□ -0.26
DDX39B-209ENST00000428450 DDX19BQ9UMR2 479 aa13.4□□□□□ -0.26
DDX39B-209ENST00000428450 NR2E1Q9Y466 385 aa13.4□□□□□ -0.26
DDX39B-209ENST00000428450 CCDC171Q6TFL3 1326 aa13.39□□□□□ -0.27
DDX39B-209ENST00000428450 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
DDX39B-209ENST00000428450 PI15O43692 258 aa13.39□□□□□ -0.27
DDX39B-209ENST00000428450 CD52P31358 61 aa13.39□□□□□ -0.27
DDX39B-209ENST00000428450 PUM1Q14671 1186 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDX39B-209ENST00000428450 TAF2Q6P1X5 1199 aa13.39□□□□□ -0.27
DDX39B-209ENST00000428450 TSHZ2Q9NRE2 1034 aa13.39□□□□□ -0.27
DDX39B-209ENST00000428450 DLL3Q9NYJ7 618 aa13.39□□□□□ -0.27
DDX39B-209ENST00000428450 NOP56O00567 594 aaKnown RBP13.38□□□□□ -0.27
DDX39B-209ENST00000428450 FGAP02671 866 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 NPR3P17342 541 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 HOXB8P17481 243 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-209ENST00000428450 ANGPT1Q15389 498 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 METTL7BQ6UX53 244 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 CYFIP1Q7L576 1253 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 CCDC105Q8IYK2 499 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 KIAA2013Q8IYS2 634 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 PI4K2BQ8TCG2 481 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 MFSD1Q9H3U5 465 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 POMKQ9H5K3 350 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 JMJD4Q9H9V9 463 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 MAP3K20Q9NYL2 800 aaKnown RBP13.38□□□□□ -0.27
DDX39B-209ENST00000428450 CDY2AQ9Y6F7 541 aa13.38□□□□□ -0.27
DDX39B-209ENST00000428450 MBLAC1A4D2B0 266 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-209ENST00000428450 FGF18O76093 207 aa13.37□□□□□ -0.27
DDX39B-209ENST00000428450 LMNAP02545 664 aaKnown RBP13.37□□□□□ -0.27
DDX39B-209ENST00000428450 ASGR2P07307 311 aa13.37□□□□□ -0.27
DDX39B-209ENST00000428450 STAG3L1P0CL83 205 aa13.37□□□□□ -0.27
DDX39B-209ENST00000428450 AOC1P19801 751 aa13.37□□□□□ -0.27
DDX39B-209ENST00000428450 HOXA13P31271 388 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-209ENST00000428450 SEMA3FQ13275 785 aa13.37□□□□□ -0.27
DDX39B-209ENST00000428450 PDE12Q6L8Q7 609 aaKnown RBP13.37□□□□□ -0.27
DDX39B-209ENST00000428450 DGKHQ86XP1 1220 aa13.37□□□□□ -0.27
DDX39B-209ENST00000428450 DNAJB3Q8WWF6 145 aa13.37□□□□□ -0.27
DDX39B-209ENST00000428450 FTHL17Q9BXU8 183 aa13.37□□□□□ -0.27
DDX39B-209ENST00000428450 VAT1LQ9HCJ6 419 aa13.37□□□□□ -0.27
DDX39B-209ENST00000428450 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-209ENST00000428450 PCDHB12Q9Y5F1 795 aa13.37□□□□□ -0.27
DDX39B-209ENST00000428450 CHD8Q9HCK8 2581 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 KAT6AQ92794 2004 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 SPATA31C2B4DYI2 1134 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 PPP1R11O60927 126 aaPredicted RBP13.36□□□□□ -0.27
DDX39B-209ENST00000428450 SRGAP2BP0DMP2 458 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 SCG2P13521 617 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 CCND2P30279 289 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 MRPS9P82933 396 aaKnown RBP13.36□□□□□ -0.27
DDX39B-209ENST00000428450 NEDD9Q14511 834 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 MARCH8Q5T0T0 291 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 UTP14CQ5TAP6 766 aaKnown RBP13.36□□□□□ -0.27
DDX39B-209ENST00000428450 LLGL2Q6P1M3 1020 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 RSPH3Q86UC2 560 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 PNMA1Q8ND90 353 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 FLCNQ8NFG4 579 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 ZKSCAN3Q9BRR0 538 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 SEMA4AQ9H3S1 761 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 TMEM260Q9NX78 707 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 SQORQ9Y6N5 450 aa13.36□□□□□ -0.27
DDX39B-209ENST00000428450 MAP1BP46821 2468 aaKnown RBP13.35□□□□□ -0.27
DDX39B-209ENST00000428450 BAHCC1Q9P281 2608 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 GPR179Q6PRD1 2367 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 HIDE1A8MVS5 230 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 MS4A1P11836 297 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 APOBRQ0VD83 1088 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 PLPP4Q5VZY2 271 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 ZDHHC14Q8IZN3 488 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 SAMD3Q8N6K7 520 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 DTWD2Q8NBA8 298 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 KCNG4Q8TDN1 519 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 NECTIN4Q96NY8 510 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 INPP4AQ96PE3 977 aaPredicted RBP13.35□□□□□ -0.27
DDX39B-209ENST00000428450 AMNQ9BXJ7 453 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 ADAM7Q9H2U9 754 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 TMX1Q9H3N1 280 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 HCSTQ9UBK5 93 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 LIMD1Q9UGP4 676 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 PADI3Q9ULW8 664 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 TTC41PQ6P2S7 1318 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 MYH6P13533 1939 aa13.35□□□□□ -0.27
DDX39B-209ENST00000428450 HAND2P61296 217 aa13.34□□□□□ -0.27
DDX39B-209ENST00000428450 MRPS6P82932 125 aaKnown RBP13.34□□□□□ -0.27
DDX39B-209ENST00000428450 ITIH3Q06033 890 aa13.34□□□□□ -0.27
DDX39B-209ENST00000428450 ASPRV1Q53RT3 343 aa13.34□□□□□ -0.27
DDX39B-209ENST00000428450 COLGALT1Q8NBJ5 622 aa13.34□□□□□ -0.27
DDX39B-209ENST00000428450 ZBTB10Q96DT7 871 aa13.34□□□□□ -0.27
DDX39B-209ENST00000428450 MTMR8Q96EF0 704 aa13.34□□□□□ -0.27
DDX39B-209ENST00000428450 DCTPP1Q9H773 170 aa13.34□□□□□ -0.27
DDX39B-209ENST00000428450 AAASQ9NRG9 546 aa13.34□□□□□ -0.27
DDX39B-209ENST00000428450 TUBE1Q9UJT0 475 aa13.34□□□□□ -0.27
DDX39B-209ENST00000428450 LZTS1Q9Y250 596 aa13.34□□□□□ -0.27
DDX39B-209ENST00000428450 DOCK5Q9H7D0 1870 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms