RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 SLC44A5Q8NCS7 719 aa11.74□□□□□ -0.53
ATP2C1-204ENST00000428331 SETDB2Q96T68 719 aa11.74□□□□□ -0.53
ATP2C1-204ENST00000428331 GPCPD1Q9NPB8 672 aa11.74□□□□□ -0.53
ATP2C1-204ENST00000428331 INTS9Q9NV88 658 aaKnown RBP11.74□□□□□ -0.53
ATP2C1-204ENST00000428331 TMEM260Q9NX78 707 aa11.74□□□□□ -0.53
ATP2C1-204ENST00000428331 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
ATP2C1-204ENST00000428331 KANSL2Q9H9L4 492 aa11.74□□□□□ -0.53
ATP2C1-204ENST00000428331 IL17RBQ9NRM6 502 aa11.74□□□□□ -0.53
ATP2C1-204ENST00000428331 BLOC1S4Q9NUP1 217 aa11.74□□□□□ -0.53
ATP2C1-204ENST00000428331 RBAK-RBAKDNI3L0D1 243 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 CAMTA2O94983 1202 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 CLTAP09496 248 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 LRRC55Q6ZSA7 311 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 TAOK1Q7L7X3 1001 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 ACTRT1Q8TDG2 376 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 CUL5Q93034 780 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 COA7Q96BR5 231 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 SLC4A9Q96Q91 983 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 HAUS2Q9NVX0 235 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 DDX20Q9UHI6 824 aaKnown RBP11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 MYH2Q9UKX2 1941 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 CYTH3O43739 400 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 TDP2O95551 362 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 GCFC2P16383 781 aaKnown RBP11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 FERP16591 822 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 SF3B3Q15393 1217 aaKnown RBP11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 ZNF804AQ7Z570 1209 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 NEK9Q8TD19 979 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 PAGR1Q9BTK6 254 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 COL5A2P05997 1499 aaPredicted RBP11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 PLA2G4BP0C869 781 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 GSCP56915 257 aaPredicted RBP11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 HGSNATQ68CP4 663 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 ZKSCAN4Q969J2 545 aaPredicted RBP11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 AIPL1Q9NZN9 384 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 PARP2Q9UGN5 583 aa11.73□□□□□ -0.53
ATP2C1-204ENST00000428331 BACH1O14867 736 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 TRAPPC3O43617 180 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 KCNMA1Q12791 1236 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 SH3RF3Q8TEJ3 882 aaPredicted RBP11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 PACSIN1Q9BY11 444 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 SLAIN2Q9P270 581 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 SUFUQ9UMX1 484 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 ESYT2A0FGR8 921 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 FGGP02679 453 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 TNFAIP3P21580 790 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 ANXA13P27216 316 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 FNTAP49354 379 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 BYSLQ13895 437 aaKnown RBP11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 CLEC4GQ6UXB4 293 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 TPTE2Q6XPS3 522 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 TCP11Q8WWU5 503 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 RAPGEF5Q92565 580 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 IFT74Q96LB3 600 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 GLT8D2Q9H1C3 349 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 DNM3Q9UQ16 869 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 PHF20L1A8MW92 1017 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 CDK8P49336 464 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 PTK2Q05397 1052 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 ZNF844Q08AG5 666 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 SF3A3Q12874 501 aaKnown RBP eCLIP11.72□□□□□ -0.535e-6■■□□□ 14.3
ATP2C1-204ENST00000428331 DDB1Q16531 1140 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 ASTE1Q2TB18 679 aaPredicted RBP11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 METTL13Q8N6R0 699 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 MMTAG2Q9BU76 263 aaKnown RBP11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 TIAM2Q8IVF5 1701 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 FRMPD2Q68DX3 1309 aaPredicted RBP11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 DCCP43146 1447 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 CLGNO14967 610 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 MMEP08473 750 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 GBP1P32455 592 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 PLTPP55058 493 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 EVX2Q03828 476 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 FOXR2Q6PJQ5 311 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 TBC1D31Q96DN5 1066 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 PNMA5Q96PV4 448 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 HOMER3Q9NSC5 361 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 DONSONQ9NYP3 566 aa11.72□□□□□ -0.53
ATP2C1-204ENST00000428331 TTI1O43156 1089 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 SMARCA1P28370 1054 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 ASPRV1Q53RT3 343 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 EMC10Q5UCC4 262 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 TRIM59Q8IWR1 403 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 NEDD1Q8NHV4 660 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 XPO6Q96QU8 1125 aaKnown RBP11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 MYO5AQ9Y4I1 1855 aaKnown RBP11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 SPDYE3A6NKU9 549 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 TRIM37O94972 964 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 LMNB1P20700 586 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 ABCB4P21439 1286 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 DR1Q01658 176 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 PREPLQ4J6C6 727 aaPredicted RBP11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 NUP188Q5SRE5 1749 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 ADAT2Q7Z6V5 191 aaKnown RBP11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 FUKQ8N0W3 1084 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 UBL4BQ8N7F7 174 aa11.71□□□□□ -0.53
ATP2C1-204ENST00000428331 GOLPH3Q9H4A6 298 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms