RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 PP2D1A8MPX8 630 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 RGS16O15492 202 aaPredicted RBP10.55□□□□□ -0.72
SNX13-203ENST00000428135 SARNPP82979 210 aaKnown RBP10.55□□□□□ -0.72
SNX13-203ENST00000428135 SRGAP1Q7Z6B7 1085 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 STAG2Q8N3U4 1231 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 LINC00301Q8NCQ3 95 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 ALKBH8Q96BT7 664 aaKnown RBP10.55□□□□□ -0.72
SNX13-203ENST00000428135 PAGE5Q96GU1 130 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 RAB17Q9H0T7 212 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 ZBTB5O15062 677 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 MOCS3O95396 460 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 IFNAR1P17181 557 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 GAP43P17677 238 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 KCNA4P22459 653 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 TEX2Q8IWB9 1127 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 ACRBPQ8NEB7 543 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 GDAP1Q8TB36 358 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 FHDC1Q9C0D6 1143 aaPredicted RBP10.55□□□□□ -0.72
SNX13-203ENST00000428135 HYOU1Q9Y4L1 999 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 ANXA13P27216 316 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 MYO1EQ12965 1108 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 TRMT2AQ8IZ69 625 aaKnown RBP10.55□□□□□ -0.72
SNX13-203ENST00000428135 DNAAF3Q8N9W5 541 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 PPP4R1Q8TF05 950 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 ABCC12Q96J65 1359 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 UTYO14607 1347 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 POTEB3A0JP26 581 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 POTECB2RU33 542 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 KRT1P04264 644 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 GCFC2P16383 781 aaKnown RBP10.55□□□□□ -0.72
SNX13-203ENST00000428135 ZNF658Q5TYW1 1059 aaPredicted RBP10.55□□□□□ -0.72
SNX13-203ENST00000428135 POTEBQ6S5H4 581 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 KCTD6Q8NC69 237 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 RNF139Q8WU17 664 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 GABBR1Q9UBS5 961 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 ANAPC5Q9UJX4 755 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 LAD1O00515 517 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 NEDD9Q14511 834 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 ERCC6LQ2NKX8 1250 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 LRRC8AQ8IWT6 810 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 AFAP1L2Q8N4X5 818 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 SPATA17Q96L03 361 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 SPATA33Q96N06 139 aa10.55□□□□□ -0.72
SNX13-203ENST00000428135 AGLP35573 1532 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 TRIM49BA6NDI0 452 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 STX2P32856 288 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 MXI1P50539 228 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 FOXO4P98177 505 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 GUCY2DQ02846 1103 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 CEP128Q6ZU80 1094 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 ATP2A3Q93084 1043 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 FAM213AQ9BRX8 229 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 STK38LQ9Y2H1 464 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 POTEFA5A3E0 1075 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 CACNB2Q08289 660 aaPredicted RBP10.54□□□□□ -0.72
SNX13-203ENST00000428135 TMEM62Q0P6H9 643 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 POTEGQ6S5H5 508 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 POTEEQ6S8J3 1075 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 RAET1EQ8TD07 263 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 MAIP1Q8WWC4 291 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 MAGOHBQ96A72 148 aaKnown RBP10.54□□□□□ -0.72
SNX13-203ENST00000428135 SOWAHDA6NJG2 315 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 UPP2O95045 317 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 CASP2P42575 452 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 NECTIN1Q15223 517 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 CYP4F22Q6NT55 531 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 DNAJC24Q6P3W2 148 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 TMTC3Q6ZXV5 915 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 PDZD4Q76G19 769 aaPredicted RBP10.54□□□□□ -0.72
SNX13-203ENST00000428135 SPATA24Q86W54 205 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 APOBEC3FQ8IUX4 373 aaKnown RBP10.54□□□□□ -0.72
SNX13-203ENST00000428135 MCUR1Q96AQ8 359 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 AK8Q96MA6 479 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 OSBPL3Q9H4L5 887 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.54□□□□□ -0.72
SNX13-203ENST00000428135 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 FEM1BQ9UK73 627 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 PIK3R2O00459 728 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 GYS1P13807 737 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 CDC27P30260 824 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 SLC35F6Q8N357 371 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 STAG1Q8WVM7 1258 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 DDNO94850 711 aaPredicted RBP10.54□□□□□ -0.72
SNX13-203ENST00000428135 CTSHP09668 335 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 TRAPPC10P48553 1259 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 CYP27A1Q02318 531 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 ZNF568Q3ZCX4 644 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 TMTC4Q5T4D3 741 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 TRIML1Q8N9V2 468 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 DCAF4Q8WV16 495 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 CCDC94Q9BW85 323 aaPredicted RBP10.54□□□□□ -0.72
SNX13-203ENST00000428135 TMEM206Q9H813 350 aa10.54□□□□□ -0.72
SNX13-203ENST00000428135 TSR3Q9UJK0 312 aaKnown RBP10.54□□□□□ -0.72
SNX13-203ENST00000428135 BASP1P80723 227 aaKnown RBP10.53□□□□□ -0.72
SNX13-203ENST00000428135 SATB1Q01826 763 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 HDAC11Q96DB2 347 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 EFCC1Q9HA90 598 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 POLR3EQ9NVU0 708 aa10.53□□□□□ -0.72
SNX13-203ENST00000428135 NEXMIFQ5QGS0 1516 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms