RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 GRIK4Q16099 956 aa11.52□□□□□ -0.57
GACAT3-201ENST00000426539 ADCK5Q3MIX3 580 aa11.52□□□□□ -0.57
GACAT3-201ENST00000426539 EPC2Q52LR7 807 aa11.52□□□□□ -0.57
GACAT3-201ENST00000426539 BMP2KLQ5H9B9 411 aa11.52□□□□□ -0.57
GACAT3-201ENST00000426539 APOA5Q6Q788 366 aa11.52□□□□□ -0.57
GACAT3-201ENST00000426539 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
GACAT3-201ENST00000426539 CYP2W1Q8TAV3 490 aa11.52□□□□□ -0.57
GACAT3-201ENST00000426539 CDHR1Q96JP9 859 aa11.52□□□□□ -0.57
GACAT3-201ENST00000426539 PGBD1Q96JS3 809 aa11.52□□□□□ -0.57
GACAT3-201ENST00000426539 IFIH1Q9BYX4 1025 aaKnown RBP11.52□□□□□ -0.57
GACAT3-201ENST00000426539 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
GACAT3-201ENST00000426539 XIRP2A4UGR9 3374 aa11.52□□□□□ -0.57
GACAT3-201ENST00000426539 TCF20Q9UGU0 1960 aaKnown RBP11.52□□□□□ -0.57
GACAT3-201ENST00000426539 TRANK1O15050 2925 aa11.52□□□□□ -0.57
GACAT3-201ENST00000426539 SPDYE3A6NKU9 549 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 LPIN1Q14693 890 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 TAF2Q6P1X5 1199 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 DNAJB3Q8WWF6 145 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 APBB2Q92870 758 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 KHSRPQ92945 711 aaKnown RBP eCLIP11.51□□□□□ -0.57
GACAT3-201ENST00000426539 NEK1Q96PY6 1258 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 YME1L1Q96TA2 773 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 MXRA8Q9BRK3 442 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 SMARCAD1Q9H4L7 1026 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 EPHX3Q9H6B9 360 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 UBE2ZQ9H832 354 aaPredicted RBP11.51□□□□□ -0.57
GACAT3-201ENST00000426539 CD320Q9NPF0 282 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 KCNH7Q9NS40 1196 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 ERAP1Q9NZ08 941 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 MICAL3Q7RTP6 2002 aa11.51□□□□□ -0.57
GACAT3-201ENST00000426539 COL4A6Q14031 1691 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 H3BNC9 293 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 STXBP3O00186 592 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 MAFGO15525 162 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 ARP10275 920 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 CDC27P30260 824 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 ITGB3BPQ13352 177 aaPredicted RBP11.5□□□□□ -0.57
GACAT3-201ENST00000426539 TSGA10IPQ3SY00 556 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 FBXO47Q5MNV8 452 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 DHX32Q7L7V1 743 aaKnown RBP11.5□□□□□ -0.57
GACAT3-201ENST00000426539 TMEM192Q8IY95 271 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 GLG1Q92896 1179 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 MRPL38Q96DV4 380 aaKnown RBP11.5□□□□□ -0.57
GACAT3-201ENST00000426539 AGO3Q9H9G7 860 aaKnown RBP11.5□□□□□ -0.57
GACAT3-201ENST00000426539 RC3H2Q9HBD1 1191 aaKnown RBP11.5□□□□□ -0.57
GACAT3-201ENST00000426539 JPH1Q9HDC5 661 aaPredicted RBP11.5□□□□□ -0.57
GACAT3-201ENST00000426539 RIC8AQ9NPQ8 531 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 TMEM260Q9NX78 707 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 TUBE1Q9UJT0 475 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 CDY2AQ9Y6F7 541 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 V9GY48 417 aaPredicted RBP11.5□□□□□ -0.57
GACAT3-201ENST00000426539 SIP14410 1827 aa11.5□□□□□ -0.57
GACAT3-201ENST00000426539 ENPP3O14638 875 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 ADAMTS3O15072 1205 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 INSRRP14616 1297 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 CLK2P49760 499 aaKnown RBP11.49□□□□□ -0.57
GACAT3-201ENST00000426539 NAPAP54920 295 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 ACTR2P61160 394 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 IGBP1P78318 339 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 GPM6BQ13491 265 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 PLCB4Q15147 1175 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 RTN1Q16799 776 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 LEXMQ3ZCV2 418 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 RNF20Q5VTR2 975 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 RTN4RL1Q86UN2 441 aaPredicted RBP11.49□□□□□ -0.57
GACAT3-201ENST00000426539 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.49□□□□□ -0.57
GACAT3-201ENST00000426539 TRAPPC12Q8WVT3 735 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 LINC01599Q8WXQ3 324 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 SAMD11Q96NU1 681 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 ANO3Q9BYT9 981 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 AGO4Q9HCK5 861 aaKnown RBP11.49□□□□□ -0.57
GACAT3-201ENST00000426539 RBM28Q9NW13 759 aaKnown RBP11.49□□□□□ -0.57
GACAT3-201ENST00000426539 SLC9A2Q9UBY0 812 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 NFASCO94856 1347 aa11.49□□□□□ -0.57
GACAT3-201ENST00000426539 MEIS1O00470 390 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 ZBTB43O43298 467 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 ATG7O95352 703 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 CCNE2O96020 404 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 CPA1P15085 419 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 KCNA5P22460 613 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 PSEN1P49768 467 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 ADCY7P51828 1080 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 MRPS6P82932 125 aaKnown RBP11.48□□□□□ -0.57
GACAT3-201ENST00000426539 COL19A1Q14993 1142 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 CEP55Q53EZ4 464 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 TCEAL5Q5H9L2 206 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 PPP1R18Q6NYC8 613 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 SYNE3Q6ZMZ3 975 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 TSHZ1Q6ZSZ6 1077 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 CRIPAKQ8N1N5 446 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 ZNF689Q96CS4 500 aaPredicted RBP11.48□□□□□ -0.57
GACAT3-201ENST00000426539 IL17RAQ96F46 866 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 BARHL2Q9NY43 387 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 NCOR1O75376 2440 aa11.48□□□□□ -0.57
GACAT3-201ENST00000426539 ADGRA3Q8IWK6 1321 aa11.47□□□□□ -0.57
GACAT3-201ENST00000426539 IGKV6D-21A0A0A0MT36 114 aa11.47□□□□□ -0.57
GACAT3-201ENST00000426539 KLF18A0A0U1RQI7 1052 aa11.47□□□□□ -0.57
GACAT3-201ENST00000426539 SMCO2A6NFE2 343 aa11.47□□□□□ -0.57
GACAT3-201ENST00000426539 RRN3P2A6NIE6 340 aa11.47□□□□□ -0.57
GACAT3-201ENST00000426539 GOLGA8AA7E2F4 631 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms