RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 FGRP09769 529 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 AARSP49588 968 aaKnown RBP eCLIP17.48■□□□□ 0.39
PKP4-205ENST00000426248 ASIC1P78348 528 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 SH3BP5LQ7L8J4 393 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 RNPC3Q96LT9 517 aaKnown RBP17.48■□□□□ 0.39
PKP4-205ENST00000426248 MAN1B1Q9UKM7 699 aa17.48■□□□□ 0.39
PKP4-205ENST00000426248 SMIM24O75264 130 aa17.47■□□□□ 0.39
PKP4-205ENST00000426248 FSBPO95073 299 aa17.47■□□□□ 0.39
PKP4-205ENST00000426248 TAL1P17542 331 aaPredicted RBP17.47■□□□□ 0.39
PKP4-205ENST00000426248 RANBP1P43487 201 aa17.47■□□□□ 0.39
PKP4-205ENST00000426248 CCNI2Q6ZMN8 369 aaPredicted RBP17.47■□□□□ 0.39
PKP4-205ENST00000426248 APOBEC3FQ8IUX4 373 aaKnown RBP17.47■□□□□ 0.39
PKP4-205ENST00000426248 EPN1Q9Y6I3 576 aaPredicted RBP17.47■□□□□ 0.39
PKP4-205ENST00000426248 A6NNZ2 444 aa17.47■□□□□ 0.39
PKP4-205ENST00000426248 TUBB8Q3ZCM7 444 aa17.47■□□□□ 0.39
PKP4-205ENST00000426248 CACNA2D3Q8IZS8 1091 aa17.47■□□□□ 0.39
PKP4-205ENST00000426248 CTAGE1Q96RT6 745 aa17.47■□□□□ 0.39
PKP4-205ENST00000426248 TPX2Q9ULW0 747 aaKnown RBP17.47■□□□□ 0.39
PKP4-205ENST00000426248 SYNRGQ9UMZ2 1314 aa17.47■□□□□ 0.39
PKP4-205ENST00000426248 BAZ2AQ9UIF9 1905 aaKnown RBP17.47■□□□□ 0.39
PKP4-205ENST00000426248 OPLAHO14841 1288 aa17.47■□□□□ 0.39
PKP4-205ENST00000426248 RWDD2BP57060 319 aa17.47■□□□□ 0.39
PKP4-205ENST00000426248 MTMR2Q13614 643 aa17.47■□□□□ 0.39
PKP4-205ENST00000426248 ZNF513Q8N8E2 541 aaPredicted RBP17.47■□□□□ 0.39
PKP4-205ENST00000426248 OR52Z1P0C646 297 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 SPA17Q15506 151 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 SPAG5Q96R06 1193 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 SBF2Q86WG5 1849 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 AKAP11Q9UKA4 1901 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 MYH13Q9UKX3 1938 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 CAP2P40123 477 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 FXR1P51114 621 aaKnown RBP eCLIP17.46■□□□□ 0.39
PKP4-205ENST00000426248 HMGCS2P54868 508 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 TBC1D8BQ0IIM8 1120 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 THEMIS2Q5TEJ8 643 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 SNX29Q8TEQ0 813 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 VPS33BQ9H267 617 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 SH3BP1Q9Y3L3 701 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 STXBP3O00186 592 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 EARS2Q5JPH6 523 aaKnown RBP17.46■□□□□ 0.39
PKP4-205ENST00000426248 TBC1D1Q86TI0 1168 aaPredicted RBP17.46■□□□□ 0.39
PKP4-205ENST00000426248 LMBR1Q8WVP7 490 aa17.46■□□□□ 0.39
PKP4-205ENST00000426248 DDX25Q9UHL0 483 aaKnown RBP17.46■□□□□ 0.39
PKP4-205ENST00000426248 GRIN1Q05586 938 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 GABPAQ06546 454 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 USP49Q70CQ1 688 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 METTL16Q86W50 562 aaKnown RBP17.45■□□□□ 0.38
PKP4-205ENST00000426248 GLT8D2Q9H1C3 349 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 CTNND2Q9UQB3 1225 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 ESYT3A0FGR9 886 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 PCDHA12Q9UN75 941 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 STK38LQ9Y2H1 464 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 ZNF541Q9H0D2 1346 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 GCOM1H8Y6P7 765 aaPredicted RBP17.45■□□□□ 0.38
PKP4-205ENST00000426248 PPP1R37O75864 691 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 POLR2MP0CAP2 368 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 TRAPPC10P48553 1259 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 KIF5AQ12840 1032 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 CABP7Q86V35 215 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 CCDC113Q9H0I3 377 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 EPN3Q9H201 632 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 SH3GLB2Q9NR46 395 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 LUC7L2Q9Y383 392 aaKnown RBP17.45■□□□□ 0.38
PKP4-205ENST00000426248 SNUPNO95149 360 aaKnown RBP17.45■□□□□ 0.38
PKP4-205ENST00000426248 RAVER2Q9HCJ3 691 aaKnown RBP17.45■□□□□ 0.38
PKP4-205ENST00000426248 PCDHA6Q9UN73 950 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 MRPL11Q9Y3B7 192 aaKnown RBP17.45■□□□□ 0.38
PKP4-205ENST00000426248 PCDHA8Q9Y5H6 950 aa17.45■□□□□ 0.38
PKP4-205ENST00000426248 TRIM21P19474 475 aaKnown RBP17.44■□□□□ 0.38
PKP4-205ENST00000426248 PTPREP23469 700 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 CASP1P29466 404 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 SHC4Q6S5L8 630 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 TRPM4Q8TD43 1214 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 STAMBPL1Q96FJ0 436 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 SRPRBQ9Y5M8 271 aaKnown RBP17.44■□□□□ 0.38
PKP4-205ENST00000426248 UBR3Q6ZT12 1888 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 LRRC1Q9BTT6 524 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 HSD3B7Q9H2F3 369 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 DNAJC18Q9H819 358 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 A1CFQ9NQ94 594 aaKnown RBP17.44■□□□□ 0.38
PKP4-205ENST00000426248 SMARCAL1Q9NZC9 954 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 PRR12Q9ULL5 1215 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 PP2D1A8MPX8 630 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 ACCSLQ4AC99 568 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 ZFYVE27Q5T4F4 411 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 TYW1BQ6NUM6 668 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 FAM83AQ86UY5 434 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 CCDC170Q8IYT3 715 aa17.44■□□□□ 0.38
PKP4-205ENST00000426248 ACTR5Q9H9F9 607 aaPredicted RBP17.44■□□□□ 0.38
PKP4-205ENST00000426248 AMPD3Q01432 767 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 DYMQ7RTS9 669 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 ARFGAP2Q8N6H7 521 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 ZNF483Q8TF39 744 aaPredicted RBP17.43■□□□□ 0.38
PKP4-205ENST00000426248 EEF2KMTQ96G04 330 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 OTUD5Q96G74 571 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 CHP1Q99653 195 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 GLIS2Q9BZE0 524 aaPredicted RBP17.43■□□□□ 0.38
PKP4-205ENST00000426248 TOB1P50616 345 aaPredicted RBP17.43■□□□□ 0.38
PKP4-205ENST00000426248 CCDC63Q8NA47 563 aa17.43■□□□□ 0.38
PKP4-205ENST00000426248 L3MBTL1Q9Y468 752 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms