RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 FOXE3Q13461 319 aa7.76□□□□□ -1.17
LINC01040-201ENST00000425048 ANKS3Q6ZW76 656 aa7.76□□□□□ -1.17
LINC01040-201ENST00000425048 MCF2L2Q86YR7 1114 aa7.76□□□□□ -1.17
LINC01040-201ENST00000425048 ARHGEF4Q9NR80 690 aa7.76□□□□□ -1.17
LINC01040-201ENST00000425048 CUTAO60888 179 aa7.75□□□□□ -1.17
LINC01040-201ENST00000425048 ZNF888P0CJ79 500 aaPredicted RBP7.75□□□□□ -1.17
LINC01040-201ENST00000425048 IFRD2Q12894 506 aaPredicted RBP7.75□□□□□ -1.17
LINC01040-201ENST00000425048 EDAQ92838 391 aa7.75□□□□□ -1.17
LINC01040-201ENST00000425048 ALG1Q9BT22 464 aa7.75□□□□□ -1.17
LINC01040-201ENST00000425048 IPPKQ9H8X2 491 aa7.75□□□□□ -1.17
LINC01040-201ENST00000425048 PTPN22Q9Y2R2 807 aa7.75□□□□□ -1.17
LINC01040-201ENST00000425048 COMTP21964 271 aa7.74□□□□□ -1.17
LINC01040-201ENST00000425048 DBPQ10586 325 aaPredicted RBP7.74□□□□□ -1.17
LINC01040-201ENST00000425048 KLF10Q13118 480 aa7.74□□□□□ -1.17
LINC01040-201ENST00000425048 NRN1LQ496H8 165 aa7.74□□□□□ -1.17
LINC01040-201ENST00000425048 NLGN4XQ8N0W4 816 aa7.74□□□□□ -1.17
LINC01040-201ENST00000425048 ST13P5Q8NFI4 369 aaPredicted RBP7.74□□□□□ -1.17
LINC01040-201ENST00000425048 SLC39A2Q9NP94 309 aa7.74□□□□□ -1.17
LINC01040-201ENST00000425048 TRAV20A0A0B4J274 112 aa7.73□□□□□ -1.17
LINC01040-201ENST00000425048 ESYT3A0FGR9 886 aa7.73□□□□□ -1.17
LINC01040-201ENST00000425048 BLACEA4D250 179 aa7.73□□□□□ -1.17
LINC01040-201ENST00000425048 NPIPB8E9PQR5 432 aa7.73□□□□□ -1.17
LINC01040-201ENST00000425048 DNAJA1P31689 397 aaKnown RBP7.73□□□□□ -1.17
LINC01040-201ENST00000425048 AGBL4Q5VU57 503 aa7.73□□□□□ -1.17
LINC01040-201ENST00000425048 BTBD8Q5XKL5 378 aa7.73□□□□□ -1.17
LINC01040-201ENST00000425048 LRRC47Q8N1G4 583 aaKnown RBP7.73□□□□□ -1.17
LINC01040-201ENST00000425048 CD244Q9BZW8 370 aa7.73□□□□□ -1.17
LINC01040-201ENST00000425048 TOP3AQ13472 1001 aaPredicted RBP7.72□□□□□ -1.17
LINC01040-201ENST00000425048 USP39Q53GS9 565 aaKnown RBP7.72□□□□□ -1.17
LINC01040-201ENST00000425048 ZMAT1Q5H9K5 638 aa7.72□□□□□ -1.17
LINC01040-201ENST00000425048 MIIPQ5JXC2 388 aa7.72□□□□□ -1.17
LINC01040-201ENST00000425048 RNF207Q6ZRF8 634 aa7.72□□□□□ -1.17
LINC01040-201ENST00000425048 FUKQ8N0W3 1084 aa7.72□□□□□ -1.17
LINC01040-201ENST00000425048 TINF2Q9BSI4 451 aa7.72□□□□□ -1.17
LINC01040-201ENST00000425048 ING1Q9UK53 422 aaPredicted RBP7.72□□□□□ -1.17
LINC01040-201ENST00000425048 KLF4O43474 513 aa7.71□□□□□ -1.18
LINC01040-201ENST00000425048 CR2P20023 1033 aa7.71□□□□□ -1.18
LINC01040-201ENST00000425048 TGFB2P61812 414 aa7.71□□□□□ -1.18
LINC01040-201ENST00000425048 SH3RF2Q8TEC5 729 aa7.71□□□□□ -1.18
LINC01040-201ENST00000425048 ZNF503Q96F45 646 aa7.71□□□□□ -1.18
LINC01040-201ENST00000425048 SCYL1Q96KG9 808 aa7.71□□□□□ -1.18
LINC01040-201ENST00000425048 ARHGAP28Q9P2N2 729 aa7.71□□□□□ -1.18
LINC01040-201ENST00000425048 TCRBV5S4A2TA0A5A2 114 aa7.7□□□□□ -1.18
LINC01040-201ENST00000425048 RAD17O75943 681 aa7.7□□□□□ -1.18
LINC01040-201ENST00000425048 TCF3P15923 654 aa7.7□□□□□ -1.18
LINC01040-201ENST00000425048 RNF151Q2KHN1 245 aa7.7□□□□□ -1.18
LINC01040-201ENST00000425048 YOD1Q5VVQ6 348 aaPredicted RBP7.7□□□□□ -1.18
LINC01040-201ENST00000425048 RIC8BQ9NVN3 520 aa7.7□□□□□ -1.18
LINC01040-201ENST00000425048 OAZ3Q9UMX2 235 aa7.7□□□□□ -1.18
LINC01040-201ENST00000425048 ASXL2Q76L83 1435 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 PTPN1P18031 435 aaKnown RBP7.69□□□□□ -1.18
LINC01040-201ENST00000425048 ACO1P21399 889 aaKnown RBP7.69□□□□□ -1.18
LINC01040-201ENST00000425048 PAK1Q13153 545 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 FHL2Q14192 279 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 GPR19Q15760 415 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 WDR72Q3MJ13 1102 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 CRB2Q5IJ48 1285 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 ARHGAP36Q6ZRI8 547 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 Q6ZSN1 163 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 EP400NLQ6ZTU2 488 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 POLNQ7Z5Q5 900 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 EXTL1Q92935 676 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 CSRNP2Q9H175 543 aa7.69□□□□□ -1.18
LINC01040-201ENST00000425048 FAM90A27PA6NNH2 459 aa7.68□□□□□ -1.18
LINC01040-201ENST00000425048 AQP7O14520 342 aa7.68□□□□□ -1.18
LINC01040-201ENST00000425048 RRADP55042 308 aa7.68□□□□□ -1.18
LINC01040-201ENST00000425048 NOLC1Q14978 699 aaKnown RBP eCLIP7.68□□□□□ -1.18
LINC01040-201ENST00000425048 SLC43A3Q8NBI5 491 aa7.68□□□□□ -1.18
LINC01040-201ENST00000425048 ZNF669Q96BR6 464 aaPredicted RBP7.68□□□□□ -1.18
LINC01040-201ENST00000425048 FAM89AQ96GI7 184 aa7.68□□□□□ -1.18
LINC01040-201ENST00000425048 GMLQ99445 158 aa7.68□□□□□ -1.18
LINC01040-201ENST00000425048 NR2E1Q9Y466 385 aa7.68□□□□□ -1.18
LINC01040-201ENST00000425048 TRAF6Q9Y4K3 522 aa7.68□□□□□ -1.18
LINC01040-201ENST00000425048 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.67□□□□□ -1.18
LINC01040-201ENST00000425048 PLSCR1O15162 318 aa7.67□□□□□ -1.18
LINC01040-201ENST00000425048 CDC14BO60729 498 aa7.67□□□□□ -1.18
LINC01040-201ENST00000425048 ETV4P43268 484 aa7.67□□□□□ -1.18
LINC01040-201ENST00000425048 CXXC5Q7LFL8 322 aaKnown RBP7.67□□□□□ -1.18
LINC01040-201ENST00000425048 SCUBE1Q8IWY4 988 aa7.67□□□□□ -1.18
LINC01040-201ENST00000425048 FBXW5Q969U6 566 aa7.67□□□□□ -1.18
LINC01040-201ENST00000425048 ZDHHC5Q9C0B5 715 aa7.67□□□□□ -1.18
LINC01040-201ENST00000425048 C12orf65Q9H3J6 166 aaKnown RBP7.67□□□□□ -1.18
LINC01040-201ENST00000425048 CATSPERZQ9NTU4 200 aa7.67□□□□□ -1.18
LINC01040-201ENST00000425048 SRPK3Q9UPE1 567 aa7.67□□□□□ -1.18
LINC01040-201ENST00000425048 ATP23Q9Y6H3 246 aa7.67□□□□□ -1.18
LINC01040-201ENST00000425048 SLC30A1Q9Y6M5 507 aa7.67□□□□□ -1.18
LINC01040-201ENST00000425048 WNT9AO14904 365 aa7.66□□□□□ -1.18
LINC01040-201ENST00000425048 GJA4P35212 333 aa7.66□□□□□ -1.18
LINC01040-201ENST00000425048 ABHD18Q0P651 414 aa7.66□□□□□ -1.18
LINC01040-201ENST00000425048 RAB33AQ14088 237 aa7.66□□□□□ -1.18
LINC01040-201ENST00000425048 OSTM1Q86WC4 334 aa7.66□□□□□ -1.18
LINC01040-201ENST00000425048 DPYSL5Q9BPU6 564 aa7.66□□□□□ -1.18
LINC01040-201ENST00000425048 GALNT8Q9NY28 637 aa7.66□□□□□ -1.18
LINC01040-201ENST00000425048 FBXO10Q9UK96 956 aa7.66□□□□□ -1.18
LINC01040-201ENST00000425048 PTGS1P23219 599 aa7.65□□□□□ -1.18
LINC01040-201ENST00000425048 RPS19P39019 145 aaKnown RBP7.65□□□□□ -1.18
LINC01040-201ENST00000425048 PTH1RQ03431 593 aa7.65□□□□□ -1.18
LINC01040-201ENST00000425048 NFYCQ13952 458 aa7.65□□□□□ -1.18
LINC01040-201ENST00000425048 LSM12Q3MHD2 195 aaKnown RBP7.65□□□□□ -1.18
LINC01040-201ENST00000425048 MAMDC4Q6UXC1 1216 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms