RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ATF5Q9Y2D1 282 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-204ENST00000424143 MYH7BA7E2Y1 1941 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 USP17L5A8MUK1 530 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 SLC16A3O15427 465 aaKnown RBP16.67■□□□□ 0.26
C9orf3-204ENST00000424143 FLOT1O75955 427 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 HSD17B3P37058 310 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 EIF3BP55884 814 aaKnown RBP16.67■□□□□ 0.26
C9orf3-204ENST00000424143 ERVK-9P63128 1117 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 RAPGEF1Q13905 1077 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 LRRC41Q15345 812 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 BMT2Q1RMZ1 405 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-204ENST00000424143 MAPKAPK5Q8IW41 473 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 CCDC26Q8TAB7 109 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 MAGEC3Q8TD91 643 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 SCFD1Q8WVM8 642 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 MYCBPQ99417 103 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-204ENST00000424143 EMILIN3Q9NT22 766 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 MTMR4Q9NYA4 1195 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 PCDHA12Q9UN75 941 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 SAMM50Q9Y512 469 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 CAPN7Q9Y6W3 813 aa16.67■□□□□ 0.26
C9orf3-204ENST00000424143 GMNCA6NCL1 334 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 POTEMA6NI47 508 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 PDXKO00764 312 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 PLA2G4BP0C869 781 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 IL1R1P14778 569 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 KCNH2Q12809 1159 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 ADAM9Q13443 819 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 GRAPQ13588 217 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 LACTB2Q53H82 288 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-204ENST00000424143 CEP85LQ5SZL2 805 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 VPS36Q86VN1 386 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 CCDC50Q8IVM0 306 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 TEX11Q8IYF3 940 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 TPCN2Q8NHX9 752 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 GRAPLQ8TC17 118 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-204ENST00000424143 CUL5Q93034 780 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 CNOT10Q9H9A5 744 aaKnown RBP16.66■□□□□ 0.26
C9orf3-204ENST00000424143 ADAMTS1Q9UHI8 967 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 NAGPAQ9UK23 515 aa16.66■□□□□ 0.26
C9orf3-204ENST00000424143 MYH4Q9Y623 1939 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 TRAPPC3O43617 180 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 AFPP02771 609 aaKnown RBP16.65■□□□□ 0.26
C9orf3-204ENST00000424143 BTDP43251 543 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 ATP1A2P50993 1020 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 RHBDL3P58872 404 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 GUCY1A3Q02108 690 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 GABPAQ06546 454 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 ECM1Q16610 540 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 NFIL3Q16649 462 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 GPATCH4Q5T3I0 446 aaKnown RBP16.65■□□□□ 0.26
C9orf3-204ENST00000424143 KCTD16Q68DU8 428 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 EPM2AIP1Q7L775 607 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-204ENST00000424143 CROCCP2Q86T23 111 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 TEX2Q8IWB9 1127 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 TBC1D22AQ8WUA7 517 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 ACSBG1Q96GR2 724 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 KCNMB3Q9NPA1 279 aa16.65■□□□□ 0.26
C9orf3-204ENST00000424143 KCNK3O14649 394 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 TBX3O15119 743 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 RASSF9O75901 435 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 CYP11B2P19099 503 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 GUCY2FP51841 1108 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 JAM2P57087 298 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 MRPS25P82663 173 aaKnown RBP16.64■□□□□ 0.25
C9orf3-204ENST00000424143 ATP2B2Q01814 1243 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 ZNF844Q08AG5 666 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 ZNF543Q08ER8 600 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 DIXDC1Q155Q3 683 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 UAP1Q16222 522 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-204ENST00000424143 ZNF571Q7Z3V5 609 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-204ENST00000424143 SLFN12Q8IYM2 578 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 GLIS3Q8NEA6 775 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 HINFPQ9BQA5 517 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.64■□□□□ 0.254e-6■■■■□ 23.2
C9orf3-204ENST00000424143 ARMCX3Q9UH62 379 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-204ENST00000424143 SPATA31A5Q5VU36 1347 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 SPATA31A7Q8IWB4 1347 aa16.64■□□□□ 0.25
C9orf3-204ENST00000424143 A0A0G2JS52 829 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 ESYT3A0FGR9 886 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 ZSCAN5CA6NGD5 496 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-204ENST00000424143 CHUKO15111 745 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 SART1O43290 800 aaKnown RBP16.63■□□□□ 0.25
C9orf3-204ENST00000424143 CALUO43852 315 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-204ENST00000424143 H2AFZP0C0S5 128 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 GHRP10912 638 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 UCHL3P15374 230 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 FERP16591 822 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 CDR1P51861 262 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 SLC12A3P55017 1021 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 DRG2P55039 364 aaKnown RBP16.63■□□□□ 0.25
C9orf3-204ENST00000424143 PPP2R2AP63151 447 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 PTK2Q05397 1052 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 ALKBH5Q6P6C2 394 aaKnown RBP16.63■□□□□ 0.25
C9orf3-204ENST00000424143 H2AFVQ71UI9 128 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 TMC4Q7Z404 712 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 FAM133AQ8N9E0 248 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 CYFIP2Q96F07 1278 aa16.63■□□□□ 0.25
C9orf3-204ENST00000424143 TXLNGYQ9BZA5 131 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms