RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 FAM47CQ5HY64 1035 aa20.83■□□□□ 0.93
HDAC6-205ENST00000423941 TTC38Q5R3I4 469 aa20.83■□□□□ 0.93
HDAC6-205ENST00000423941 SWSAP1Q6NVH7 229 aa20.83■□□□□ 0.93
HDAC6-205ENST00000423941 AZI2Q9H6S1 392 aa20.83■□□□□ 0.93
HDAC6-205ENST00000423941 NOL7Q9UMY1 257 aaKnown RBP20.83■□□□□ 0.93
HDAC6-205ENST00000423941 CEP290O15078 2479 aa20.83■□□□□ 0.92
HDAC6-205ENST00000423941 NRCAMQ92823 1304 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 EML1O00423 815 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 BAG4O95429 457 aaKnown RBP20.82■□□□□ 0.92
HDAC6-205ENST00000423941 TIMP1P01033 207 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 MCM7P33993 719 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 PLCB4Q15147 1175 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 CALCRLQ16602 461 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 PTGISQ16647 500 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 RILPL1Q5EBL4 403 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 FAM160B1Q5W0V3 765 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 MCTP1Q6DN14 999 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 NOC4LQ9BVI4 516 aaKnown RBP20.82■□□□□ 0.92
HDAC6-205ENST00000423941 ZNF302Q9NR11 478 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 PCDHA12Q9UN75 941 aa20.82■□□□□ 0.92
HDAC6-205ENST00000423941 IGSF9BQ9UPX0 1349 aa20.81■□□□□ 0.92
HDAC6-205ENST00000423941 MBLAC1A4D2B0 266 aaPredicted RBP20.81■□□□□ 0.92
HDAC6-205ENST00000423941 ZNF862O60290 1169 aa20.81■□□□□ 0.92
HDAC6-205ENST00000423941 CYP2C9P11712 490 aa20.81■□□□□ 0.92
HDAC6-205ENST00000423941 ZNF200P98182 395 aaPredicted RBP20.81■□□□□ 0.92
HDAC6-205ENST00000423941 ZNF174Q15697 407 aa20.81■□□□□ 0.92
HDAC6-205ENST00000423941 TRIM71Q2Q1W2 868 aaKnown RBP20.81■□□□□ 0.92
HDAC6-205ENST00000423941 SERINC5Q86VE9 423 aa20.81■□□□□ 0.92
HDAC6-205ENST00000423941 DHX38Q92620 1227 aaKnown RBP20.81■□□□□ 0.92
HDAC6-205ENST00000423941 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.81■□□□□ 0.92
HDAC6-205ENST00000423941 FOXD4L1Q9NU39 408 aa20.81■□□□□ 0.92
HDAC6-205ENST00000423941 SETD4Q9NVD3 440 aa20.81■□□□□ 0.92
HDAC6-205ENST00000423941 PRKAG2Q9UGJ0 569 aa20.81■□□□□ 0.92
HDAC6-205ENST00000423941 TCEAL9Q9UHQ7 104 aa20.81■□□□□ 0.92
HDAC6-205ENST00000423941 MTMR6Q9Y217 621 aa20.81■□□□□ 0.92
HDAC6-205ENST00000423941 PCDHB6Q9Y5E3 794 aa20.81■□□□□ 0.92
HDAC6-205ENST00000423941 C17orf102A2RUQ5 167 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 PITPNM1O00562 1244 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 STBD1O95210 358 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 GNAT1P11488 350 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 PDIA4P13667 645 aaKnown RBP20.8■□□□□ 0.92
HDAC6-205ENST00000423941 ATP2B1P20020 1258 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 BMP8BP34820 402 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 CHMP4BP1P59074 171 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 PTK7Q13308 1070 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 MARCH8Q5T0T0 291 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 PDXDC2PQ6P474 469 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 MIER3Q7Z3K6 550 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 BRAPQ7Z569 592 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 ATP8B4Q8TF62 1192 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 LMBR1Q8WVP7 490 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 TNPO1Q92973 898 aaKnown RBP20.8■□□□□ 0.92
HDAC6-205ENST00000423941 TTC12Q9H892 705 aaPredicted RBP20.8■□□□□ 0.92
HDAC6-205ENST00000423941 GABBR1Q9UBS5 961 aa20.8■□□□□ 0.92
HDAC6-205ENST00000423941 POTEB3A0JP26 581 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 RRN3P2A6NIE6 340 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 BACH1O14867 736 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 TREHO43280 583 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 HBP1O60381 514 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 INSRRP14616 1297 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 RAG1P15918 1043 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 MARK3P27448 753 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 MAGEA10P43363 369 aaPredicted RBP20.79■□□□□ 0.92
HDAC6-205ENST00000423941 NBR1Q14596 966 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 EPHA7Q15375 998 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 UGCGQ16739 394 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 MFSD5Q6N075 450 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 POTEBQ6S5H4 581 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 HIPK3Q9H422 1215 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 PRDM5Q9NQX1 630 aaPredicted RBP20.79■□□□□ 0.92
HDAC6-205ENST00000423941 SAMM50Q9Y512 469 aa20.79■□□□□ 0.92
HDAC6-205ENST00000423941 ZBTB42B2RXF5 422 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 CHMP2AO43633 222 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 STX6O43752 255 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 OR52Z1P0C646 297 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 RESTQ13127 1097 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 GRIK4Q16099 956 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 RPAINQ86UA6 219 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 CAGE1Q8TC20 777 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 BBXQ8WY36 941 aaPredicted RBP20.78■□□□□ 0.92
HDAC6-205ENST00000423941 BADQ92934 168 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 ATP6V0A1Q93050 837 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 WNT8BQ93098 351 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 WNT8AQ9H1J5 351 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 PCDH10Q9P2E7 1040 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 UMODL1Q5DID0 1318 aa20.78■□□□□ 0.92
HDAC6-205ENST00000423941 COL1A2P08123 1366 aa20.77■□□□□ 0.92
HDAC6-205ENST00000423941 VPS37CA5D8V6 355 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-205ENST00000423941 LAD1O00515 517 aa20.77■□□□□ 0.92
HDAC6-205ENST00000423941 MARCH6O60337 910 aa20.77■□□□□ 0.92
HDAC6-205ENST00000423941 TXKP42681 527 aa20.77■□□□□ 0.92
HDAC6-205ENST00000423941 PPFIA1Q13136 1202 aa20.77■□□□□ 0.92
HDAC6-205ENST00000423941 PTGDRQ13258 359 aa20.77■□□□□ 0.92
HDAC6-205ENST00000423941 VWCEQ96DN2 955 aa20.77■□□□□ 0.92
HDAC6-205ENST00000423941 HSD17B14Q9BPX1 270 aa20.77■□□□□ 0.92
HDAC6-205ENST00000423941 TANC1Q9C0D5 1861 aa20.77■□□□□ 0.92
HDAC6-205ENST00000423941 P4HBP07237 508 aaKnown RBP20.76■□□□□ 0.91
HDAC6-205ENST00000423941 CYP2C18P33260 490 aa20.76■□□□□ 0.91
HDAC6-205ENST00000423941 PRPHP41219 470 aa20.76■□□□□ 0.91
HDAC6-205ENST00000423941 BFSP2Q13515 415 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms