RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 TREHO43280 583 aa24.89■■□□□ 1.58
TRAF4-204ENST00000422344 MARK3P27448 753 aa24.89■■□□□ 1.58
TRAF4-204ENST00000422344 HOXC8P31273 242 aa24.89■■□□□ 1.58
TRAF4-204ENST00000422344 THPOP40225 353 aa24.89■■□□□ 1.58
TRAF4-204ENST00000422344 ACTR2P61160 394 aa24.89■■□□□ 1.58
TRAF4-204ENST00000422344 ITGB3BPQ13352 177 aaPredicted RBP24.89■■□□□ 1.58
TRAF4-204ENST00000422344 CRYGNQ8WXF5 182 aa24.89■■□□□ 1.58
TRAF4-204ENST00000422344 UHRF1Q96T88 793 aaPredicted RBP24.89■■□□□ 1.58
TRAF4-204ENST00000422344 C22orf23Q9BZE7 217 aa24.89■■□□□ 1.58
TRAF4-204ENST00000422344 TCEAL9Q9UHQ7 104 aa24.89■■□□□ 1.58
TRAF4-204ENST00000422344 NRCAMQ92823 1304 aa24.88■■□□□ 1.57
TRAF4-204ENST00000422344 STK36Q9NRP7 1315 aa24.88■■□□□ 1.57
TRAF4-204ENST00000422344 XBP1P17861 261 aa24.88■■□□□ 1.57
TRAF4-204ENST00000422344 TRIM71Q2Q1W2 868 aaKnown RBP24.88■■□□□ 1.57
TRAF4-204ENST00000422344 ZNF618Q5T7W0 954 aa24.88■■□□□ 1.57
TRAF4-204ENST00000422344 GALNT17Q6IS24 598 aa24.88■■□□□ 1.57
TRAF4-204ENST00000422344 LMBR1Q8WVP7 490 aa24.88■■□□□ 1.57
TRAF4-204ENST00000422344 WNT8BQ93098 351 aa24.88■■□□□ 1.57
TRAF4-204ENST00000422344 ZNF577Q9BSK1 485 aa24.88■■□□□ 1.57
TRAF4-204ENST00000422344 TSPYL2Q9H2G4 693 aaPredicted RBP24.88■■□□□ 1.57
TRAF4-204ENST00000422344 TCF20Q9UGU0 1960 aaKnown RBP24.87■■□□□ 1.57
TRAF4-204ENST00000422344 IGLV3-22A0A075B6J6 115 aa24.87■■□□□ 1.57
TRAF4-204ENST00000422344 IPO5O00410 1097 aaKnown RBP24.87■■□□□ 1.57
TRAF4-204ENST00000422344 PPFIA1Q13136 1202 aa24.87■■□□□ 1.57
TRAF4-204ENST00000422344 PRR16Q569H4 304 aa24.87■■□□□ 1.57
TRAF4-204ENST00000422344 BLIDQ8IZY5 108 aa24.87■■□□□ 1.57
TRAF4-204ENST00000422344 TNPO1Q92973 898 aaKnown RBP24.87■■□□□ 1.57
TRAF4-204ENST00000422344 TRIP12Q14669 1992 aaPredicted RBP24.87■■□□□ 1.57
TRAF4-204ENST00000422344 PRRC2BQ5JSZ5 2229 aaKnown RBP24.86■■□□□ 1.57
TRAF4-204ENST00000422344 LGR5O75473 907 aa24.86■■□□□ 1.57
TRAF4-204ENST00000422344 AIFM3Q96NN9 605 aa24.86■■□□□ 1.57
TRAF4-204ENST00000422344 TBC1D22BQ9NU19 505 aa24.86■■□□□ 1.57
TRAF4-204ENST00000422344 XIRP2A4UGR9 3374 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 RSPH10B2B2RC85 870 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 RFXAPO00287 272 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 CAND2O75155 1236 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 BAIAP3O94812 1187 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 CA3P07451 260 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 RSPH10BP0C881 870 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 CIITAP33076 1130 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 USP11P51784 963 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 GRIK4Q16099 956 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 DAGLBQ8NCG7 672 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 WASF1Q92558 559 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 UIMC1Q96RL1 719 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 CERS4Q9HA82 394 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 TRPC6Q9Y210 931 aa24.85■■□□□ 1.57
TRAF4-204ENST00000422344 BACH1O14867 736 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 NBNO60934 754 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 KCNJ6P48051 423 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 STAT5BP51692 787 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 FAM160B1Q5W0V3 765 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 MIS18BP1Q6P0N0 1132 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 CNKSR3Q6P9H4 555 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 PLPPR4Q7Z2D5 763 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 NECAB1Q8N987 351 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 TBCKQ8TEA7 893 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 SLC9A7Q96T83 725 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 PCYT2Q99447 389 aa24.84■■□□□ 1.57
TRAF4-204ENST00000422344 ORC3Q9UBD5 711 aaPredicted RBP24.84■■□□□ 1.57
TRAF4-204ENST00000422344 CCNE2O96020 404 aa24.83■■□□□ 1.57
TRAF4-204ENST00000422344 CXCL10P02778 98 aa24.83■■□□□ 1.57
TRAF4-204ENST00000422344 TFF2Q03403 129 aa24.83■■□□□ 1.57
TRAF4-204ENST00000422344 SKIV2LQ15477 1246 aaKnown RBP24.83■■□□□ 1.57
TRAF4-204ENST00000422344 ME3Q16798 604 aa24.83■■□□□ 1.57
TRAF4-204ENST00000422344 C8orf34Q49A92 452 aa24.83■■□□□ 1.57
TRAF4-204ENST00000422344 TAF2Q6P1X5 1199 aa24.83■■□□□ 1.57
TRAF4-204ENST00000422344 TRAF7Q6Q0C0 670 aa24.83■■□□□ 1.57
TRAF4-204ENST00000422344 GTF3C6Q969F1 213 aa24.83■■□□□ 1.57
TRAF4-204ENST00000422344 RAPGEFL1Q9UHV5 662 aa24.83■■□□□ 1.57
TRAF4-204ENST00000422344 TUBE1Q9UJT0 475 aa24.83■■□□□ 1.57
TRAF4-204ENST00000422344 KCNJ14Q9UNX9 436 aa24.83■■□□□ 1.57
TRAF4-204ENST00000422344 RRN3P2A6NIE6 340 aa24.82■■□□□ 1.56
TRAF4-204ENST00000422344 CTSHP09668 335 aa24.82■■□□□ 1.56
TRAF4-204ENST00000422344 SLC26A2P50443 739 aa24.82■■□□□ 1.56
TRAF4-204ENST00000422344 IGBP1P78318 339 aa24.82■■□□□ 1.56
TRAF4-204ENST00000422344 ADAM17P78536 824 aa24.82■■□□□ 1.56
TRAF4-204ENST00000422344 GPNMBQ14956 572 aa24.82■■□□□ 1.56
TRAF4-204ENST00000422344 NONOQ15233 471 aaKnown RBP eCLIP24.82■■□□□ 1.562e-7■■□□□ 12.9
TRAF4-204ENST00000422344 KRT25Q7Z3Z0 450 aa24.82■■□□□ 1.56
TRAF4-204ENST00000422344 RSPH3Q86UC2 560 aa24.82■■□□□ 1.56
TRAF4-204ENST00000422344 NECAB3Q96P71 396 aaPredicted RBP24.82■■□□□ 1.56
TRAF4-204ENST00000422344 TET1Q8NFU7 2136 aa24.82■■□□□ 1.56
TRAF4-204ENST00000422344 DHX15O43143 795 aaKnown RBP24.81■■□□□ 1.56
TRAF4-204ENST00000422344 ATG7O95352 703 aa24.81■■□□□ 1.56
TRAF4-204ENST00000422344 LARGE1O95461 756 aa24.81■■□□□ 1.56
TRAF4-204ENST00000422344 CTDNEP1O95476 244 aa24.81■■□□□ 1.56
TRAF4-204ENST00000422344 KRT76Q01546 638 aa24.81■■□□□ 1.56
TRAF4-204ENST00000422344 ZNF746Q6NUN9 644 aaPredicted RBP24.81■■□□□ 1.56
TRAF4-204ENST00000422344 PHOSPHO2Q8TCD6 241 aa24.81■■□□□ 1.56
TRAF4-204ENST00000422344 PHF20Q9BVI0 1012 aa24.81■■□□□ 1.56
TRAF4-204ENST00000422344 ZNF302Q9NR11 478 aa24.81■■□□□ 1.56
TRAF4-204ENST00000422344 MTCH2Q9Y6C9 303 aa24.81■■□□□ 1.56
TRAF4-204ENST00000422344 KAT6AQ92794 2004 aa24.8■■□□□ 1.56
TRAF4-204ENST00000422344 CCDC194A0A1B0GVG4 234 aa24.8■■□□□ 1.56
TRAF4-204ENST00000422344 GTPBP6O43824 516 aaPredicted RBP24.8■■□□□ 1.56
TRAF4-204ENST00000422344 BMP1P13497 986 aa24.8■■□□□ 1.56
TRAF4-204ENST00000422344 INSRRP14616 1297 aa24.8■■□□□ 1.56
TRAF4-204ENST00000422344 IKBKEQ14164 716 aa24.8■■□□□ 1.56
TRAF4-204ENST00000422344 MBTPS1Q14703 1052 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms