RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 GJA3Q9Y6H8 435 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 ZNF521Q96K83 1311 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 SHANK2Q9UPX8 1470 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 DNAJC6O75061 913 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 TGS1Q96RS0 853 aaKnown RBP13.29□□□□□ -0.28
CLCN4-203ENST00000421085 ZC4H2Q9NQZ6 224 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.29□□□□□ -0.28
CLCN4-203ENST00000421085 HAUS5O94927 633 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 KITP10721 976 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 AP2B1P63010 937 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 TTLL11Q8NHH1 800 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 BTG4Q9NY30 223 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 ADGRG1Q9Y653 693 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 PCYT1AP49585 367 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 WDR75Q8IWA0 830 aaKnown RBP13.29□□□□□ -0.28
CLCN4-203ENST00000421085 DCTN4Q9UJW0 460 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 TRIM49BA6NDI0 452 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 LGALS16A8MUM7 142 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 COPEO14579 308 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 BTDP43251 543 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 COG1Q8WTW3 980 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 PUS7LQ9H0K6 701 aaKnown RBP13.28□□□□□ -0.28
CLCN4-203ENST00000421085 APOBEC2Q9Y235 224 aaKnown RBP13.28□□□□□ -0.28
CLCN4-203ENST00000421085 KCNA6P17658 529 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 LRRC14Q15048 493 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 C8orf37Q96NL8 207 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 HSPA4LO95757 839 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 FOSP01100 380 aaPredicted RBP13.28□□□□□ -0.28
CLCN4-203ENST00000421085 CASP1P29466 404 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 RHOT2Q8IXI1 618 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 FAM161BQ96MY7 647 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 NUDCD1Q96RS6 583 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 TTC1Q99614 292 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 SPC25Q9HBM1 224 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 IRAK4Q9NWZ3 460 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 ZSWIM5Q9P217 1185 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 WARS2Q9UGM6 360 aaKnown RBP13.28□□□□□ -0.28
CLCN4-203ENST00000421085 PLXNC1O60486 1568 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 NVLO15381 856 aaKnown RBP13.28□□□□□ -0.28
CLCN4-203ENST00000421085 CTIFO43310 598 aaKnown RBP13.28□□□□□ -0.28
CLCN4-203ENST00000421085 PRPF3O43395 683 aaKnown RBP13.28□□□□□ -0.28
CLCN4-203ENST00000421085 ABL1P00519 1130 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 IQCB1Q15051 598 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 CERKLQ49MI3 558 aaPredicted RBP13.28□□□□□ -0.28
CLCN4-203ENST00000421085 SLFN13Q68D06 897 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 SESTD1Q86VW0 696 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 OSBP2Q969R2 916 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 TRIM15Q9C019 465 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 CXorf56Q9H5V9 222 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 GPR108Q9NPR9 543 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 ZNF711Q9Y462 761 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 HNRNPCP07910 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLCN4-203ENST00000421085 ADD2P35612 726 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 VSNL1P62760 191 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 CHRNDQ07001 517 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 ARHGAP18Q8N392 663 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 TRPV6Q9H1D0 765 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 GREM2Q9H772 168 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 GJB4Q9NTQ9 266 aa13.28□□□□□ -0.28
CLCN4-203ENST00000421085 LRRC53A6NM62 1247 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 MAN1A2O60476 641 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 CIAO1O76071 339 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 PDE8BO95263 885 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 KPNA2P52292 529 aaKnown RBP13.27□□□□□ -0.28
CLCN4-203ENST00000421085 THOC5Q13769 683 aaKnown RBP13.27□□□□□ -0.28
CLCN4-203ENST00000421085 FMR1NBQ8N0W7 255 aaPredicted RBP13.27□□□□□ -0.28
CLCN4-203ENST00000421085 KCNF1Q9H3M0 494 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 ZNF518AQ6AHZ1 1483 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 MEFVO15553 781 aaPredicted RBP13.27□□□□□ -0.28
CLCN4-203ENST00000421085 UBXN2AP68543 259 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 OCRLQ01968 901 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 TOB2Q14106 344 aaPredicted RBP13.27□□□□□ -0.28
CLCN4-203ENST00000421085 OLFM3Q96PB7 478 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 ADPGKQ9BRR6 497 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 WDR70Q9NW82 654 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 CCNL1Q9UK58 526 aaPredicted RBP13.27□□□□□ -0.28
CLCN4-203ENST00000421085 IVNS1ABPQ9Y6Y0 642 aa13.27□□□□□ -0.28
CLCN4-203ENST00000421085 GOLGA8CPA6NN73 597 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 PLA2G4BP0C869 781 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 HSPA8P11142 646 aaKnown RBP13.27□□□□□ -0.29
CLCN4-203ENST00000421085 PI4K2BQ8TCG2 481 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 WDR24Q96S15 920 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 ZNF577Q9BSK1 485 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 TAF1DQ9H5J8 278 aaPredicted RBP13.27□□□□□ -0.29
CLCN4-203ENST00000421085 DNMT1P26358 1616 aaKnown RBP13.27□□□□□ -0.29
CLCN4-203ENST00000421085 PCCAP05165 728 aaPredicted RBP13.27□□□□□ -0.29
CLCN4-203ENST00000421085 PROSER3Q2NL68 480 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 SLC17A8Q8NDX2 589 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 TMEM206Q9H813 350 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 SYNGAP1Q96PV0 1343 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 MAST1Q9Y2H9 1570 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 M0QZ92 97 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 PRKAB2O43741 272 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 ICA1Q05084 483 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 FBXL13Q8NEE6 735 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 NDE1Q9NXR1 346 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 CEP72Q9P209 647 aa13.27□□□□□ -0.29
CLCN4-203ENST00000421085 MAGI2Q86UL8 1455 aa13.26□□□□□ -0.29
CLCN4-203ENST00000421085 ATP1A1P05023 1023 aaKnown RBP13.26□□□□□ -0.29
CLCN4-203ENST00000421085 STAT2P52630 851 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms