RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 CABP7Q86V35 215 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 C1orf131Q8NDD1 294 aaKnown RBP16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 KAT2BQ92831 832 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 L3MBTL3Q96JM7 780 aaPredicted RBP16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 AGBL1Q96MI9 1066 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 EHMT1Q9H9B1 1298 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 CLEC11AQ9Y240 323 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 GYPCP04921 128 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 ICAM1P05362 532 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 ALAS1P13196 640 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 NOL9Q5SY16 702 aaKnown RBP16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 ZNF572Q7Z3I7 529 aaPredicted RBP16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 GIMAP7Q8NHV1 300 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 STAMQ92783 540 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 PAGE5Q96GU1 130 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 UIMC1Q96RL1 719 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 SELENOOQ9BVL4 669 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 RAVER2Q9HCJ3 691 aaKnown RBP16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 LRWD1Q9UFC0 647 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 SUFUQ9UMX1 484 aa16.29■□□□□ 0.2
SEMA4D-204ENST00000420101 IQCA1LA6NCM1 817 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 MEFVO15553 781 aaPredicted RBP16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 ERCC3P19447 782 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 TNFRSF8P28908 595 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 NNTQ13423 1086 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 CUL4BQ13620 913 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 VGLL4Q14135 290 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 KCNV1Q6PIU1 500 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 TAX1BP1Q86VP1 789 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 OTUD6BQ8N6M0 293 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 AENQ8WTP8 325 aaKnown RBP16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 CALML4Q96GE6 196 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 CDK5RAP3Q96JB5 506 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 DISC1Q9NRI5 854 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 HOMER2Q9NSB8 354 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 PPP1R9AQ9ULJ8 1098 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 EPN1Q9Y6I3 576 aaPredicted RBP16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 SSC5DA1L4H1 1573 aa16.28■□□□□ 0.2
SEMA4D-204ENST00000420101 AGPSO00116 658 aa16.27■□□□□ 0.2
SEMA4D-204ENST00000420101 OPLAHO14841 1288 aa16.27■□□□□ 0.2
SEMA4D-204ENST00000420101 TEX33O43247 280 aa16.27■□□□□ 0.2
SEMA4D-204ENST00000420101 PRR16Q569H4 304 aa16.27■□□□□ 0.2
SEMA4D-204ENST00000420101 EMBQ6PCB8 327 aa16.27■□□□□ 0.2
SEMA4D-204ENST00000420101 MMGT1Q8N4V1 131 aa16.27■□□□□ 0.2
SEMA4D-204ENST00000420101 C3orf20Q8ND61 904 aa16.27■□□□□ 0.2
SEMA4D-204ENST00000420101 MAGEC3Q8TD91 643 aa16.27■□□□□ 0.2
SEMA4D-204ENST00000420101 TBC1D5Q92609 795 aa16.27■□□□□ 0.2
SEMA4D-204ENST00000420101 MTMR9Q96QG7 549 aa16.27■□□□□ 0.2
SEMA4D-204ENST00000420101 CCSER1Q9C0I3 900 aa16.27■□□□□ 0.2
SEMA4D-204ENST00000420101 DOCK1Q14185 1865 aa16.27■□□□□ 0.19
SEMA4D-204ENST00000420101 PIK3CDO00329 1044 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 KRT86O43790 486 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 EDIL3O43854 480 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 PRLRP16471 622 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 FNTAP49354 379 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 SATB1Q01826 763 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 SEMA3FQ13275 785 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 ZC3H15Q8WU90 426 aaKnown RBP16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 CDCA5Q96FF9 252 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 MED15Q96RN5 788 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 GRIN2DO15399 1336 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 H0YHG0 523 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 NDUFA10O95299 355 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 SREBF1P36956 1147 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 FXR2P51116 673 aaKnown RBP eCLIP16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 TSR1Q2NL82 804 aaKnown RBP16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 MCF2L2Q86YR7 1114 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 GJA10Q969M2 543 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 ATG4CQ96DT6 458 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 BLZF1Q9H2G9 400 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 SLC38A10Q9HBR0 1119 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 PCDHA12Q9UN75 941 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 AFG3L2Q9Y4W6 797 aa16.26■□□□□ 0.19
SEMA4D-204ENST00000420101 POTEMA6NI47 508 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 CASP1P29466 404 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 SMTNP53814 917 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 ERVK-24P63145 666 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 GNGT1P63211 74 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 UBXN2AP68543 259 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 KRT79Q5XKE5 535 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 NCAPH2Q6IBW4 605 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 SH3RF1Q7Z6J0 888 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 ACRBPQ8NEB7 543 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 P2RX7Q99572 595 aaKnown RBP16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 TAF1DQ9H5J8 278 aaPredicted RBP16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 ELP3Q9H9T3 547 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 SNCAIPQ9Y6H5 919 aa16.25■□□□□ 0.19
SEMA4D-204ENST00000420101 A0A1W2PQC6 194 aa16.24■□□□□ 0.19
SEMA4D-204ENST00000420101 KIF3CO14782 793 aa16.24■□□□□ 0.19
SEMA4D-204ENST00000420101 FDX1P10109 184 aa16.24■□□□□ 0.19
SEMA4D-204ENST00000420101 PLCG1P19174 1290 aa16.24■□□□□ 0.19
SEMA4D-204ENST00000420101 FXR1P51114 621 aaKnown RBP eCLIP16.24■□□□□ 0.19
SEMA4D-204ENST00000420101 EPHB4P54760 987 aa16.24■□□□□ 0.19
SEMA4D-204ENST00000420101 PREPLQ4J6C6 727 aaPredicted RBP16.24■□□□□ 0.19
SEMA4D-204ENST00000420101 PDXDC2PQ6P474 469 aa16.24■□□□□ 0.19
SEMA4D-204ENST00000420101 MOXD1Q6UVY6 613 aa16.24■□□□□ 0.19
SEMA4D-204ENST00000420101 PNMA8AQ86V59 439 aaPredicted RBP16.24■□□□□ 0.19
SEMA4D-204ENST00000420101 TRMT44Q8IYL2 757 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms