RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 RSPH3Q86UC2 560 aa10.96□□□□□ -0.65
CTSA-205ENST00000419493 CRYGNQ8WXF5 182 aa10.96□□□□□ -0.65
CTSA-205ENST00000419493 MYLIPQ8WY64 445 aa10.96□□□□□ -0.65
CTSA-205ENST00000419493 VWCEQ96DN2 955 aa10.96□□□□□ -0.65
CTSA-205ENST00000419493 GUCD1Q96NT3 240 aa10.96□□□□□ -0.65
CTSA-205ENST00000419493 SLC9A7Q96T83 725 aa10.96□□□□□ -0.65
CTSA-205ENST00000419493 PCYT2Q99447 389 aa10.96□□□□□ -0.65
CTSA-205ENST00000419493 CDX2Q99626 313 aaPredicted RBP10.96□□□□□ -0.65
CTSA-205ENST00000419493 ZBED2Q9BTP6 218 aa10.96□□□□□ -0.65
CTSA-205ENST00000419493 ZNF302Q9NR11 478 aa10.96□□□□□ -0.65
CTSA-205ENST00000419493 TUBE1Q9UJT0 475 aa10.96□□□□□ -0.65
CTSA-205ENST00000419493 STXBP5LQ9Y2K9 1186 aa10.96□□□□□ -0.65
CTSA-205ENST00000419493 RRN3P2A6NIE6 340 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 BAIAP3O94812 1187 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 ATG7O95352 703 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 CCNE2O96020 404 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 HOXC8P31273 242 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 CIITAP33076 1130 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 GPNMBQ14956 572 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 GRIN2CQ14957 1233 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 PLCB4Q15147 1175 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 INF2Q27J81 1249 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 C8orf34Q49A92 452 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 TAF2Q6P1X5 1199 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 PDXDC2PQ6P474 469 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 ABHD15Q6UXT9 468 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 KRT25Q7Z3Z0 450 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 FAM177A1Q8N128 213 aaPredicted RBP10.95□□□□□ -0.66
CTSA-205ENST00000419493 DAGLBQ8NCG7 672 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 DBF4BQ8NFT6 615 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 PHOSPHO2Q8TCD6 241 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 DNAJB3Q8WWF6 145 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 BRMS1Q9HCU9 246 aa10.95□□□□□ -0.66
CTSA-205ENST00000419493 YBX2Q9Y2T7 364 aaKnown RBP10.95□□□□□ -0.66
CTSA-205ENST00000419493 RANBP2P49792 3224 aaKnown RBP10.94□□□□□ -0.66
CTSA-205ENST00000419493 STK36Q9NRP7 1315 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 ABHD14A-ACY1A0A1B0GW23 586 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 M0QZ92 97 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 DHX15O43143 795 aaKnown RBP10.94□□□□□ -0.66
CTSA-205ENST00000419493 CHMP2AO43633 222 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 TLL1O43897 1013 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 MARCH6O60337 910 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 GAS7O60861 476 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 CAND2O75155 1236 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 LARGE1O95461 756 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 CTDNEP1O95476 244 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 CXCL10P02778 98 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 PSAPP07602 524 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 MYOGP15173 224 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 FOSL2P15408 326 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 SLC26A2P50443 739 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 FOSBP53539 338 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 WDR5P61964 334 aaKnown RBP10.94□□□□□ -0.66
CTSA-205ENST00000419493 ADAM17P78536 824 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 KRT76Q01546 638 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 TRIM29Q14134 588 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 LETM2Q2VYF4 491 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 LRCH2Q5VUJ6 765 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 PPP2R2DQ66LE6 453 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 ZNF746Q6NUN9 644 aaPredicted RBP10.94□□□□□ -0.66
CTSA-205ENST00000419493 RUFY4Q6ZNE9 571 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 SMAP1Q8IYB5 467 aaPredicted RBP10.94□□□□□ -0.66
CTSA-205ENST00000419493 TRAPPC12Q8WVT3 735 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 SEPT8Q92599 483 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 GTF3C6Q969F1 213 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 IL17RAQ96F46 866 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 GAS2L1Q99501 681 aaPredicted RBP10.94□□□□□ -0.66
CTSA-205ENST00000419493 PHF20Q9BVI0 1012 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 TEKT3Q9BXF9 490 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 FAM49AQ9H0Q0 323 aaPredicted RBP10.94□□□□□ -0.66
CTSA-205ENST00000419493 UPF2Q9HAU5 1272 aaKnown RBP10.94□□□□□ -0.66
CTSA-205ENST00000419493 GJB4Q9NTQ9 266 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 LIMCH1Q9UPQ0 1083 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 PCDHA11Q9Y5I1 949 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 PCDHA10Q9Y5I2 948 aa10.94□□□□□ -0.66
CTSA-205ENST00000419493 RBAK-RBAKDNI3L0D1 243 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 MSH4O15457 936 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 HBP1O60381 514 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 EFCAB14O75071 495 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 TDP2O95551 362 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 MBTPS1Q14703 1052 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 MARCH8Q5T0T0 291 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 FAM117BQ6P1L5 589 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 TRAF7Q6Q0C0 670 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 PIK3AP1Q6ZUJ8 805 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 TMCO2Q7Z6W1 182 aaPredicted RBP10.93□□□□□ -0.66
CTSA-205ENST00000419493 HERC6Q8IVU3 1022 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 CCDC60Q8IWA6 550 aaPredicted RBP10.93□□□□□ -0.66
CTSA-205ENST00000419493 MYOCDQ8IZQ8 938 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 SLC17A8Q8NDX2 589 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 GJA10Q969M2 543 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 ZBTB10Q96DT7 871 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 PRDM12Q9H4Q4 367 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 GABBR1Q9UBS5 961 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 TANC1Q9C0D5 1861 aa10.93□□□□□ -0.66
CTSA-205ENST00000419493 IGKV6D-21A0A0A0MT36 114 aa10.92□□□□□ -0.66
CTSA-205ENST00000419493 MBLAC1A4D2B0 266 aaPredicted RBP10.92□□□□□ -0.66
CTSA-205ENST00000419493 WDR64B1ANS9 1081 aa10.92□□□□□ -0.66
CTSA-205ENST00000419493 M0R2N6 131 aa10.92□□□□□ -0.66
CTSA-205ENST00000419493 EDIL3O43854 480 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms