RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 NUB1Q9Y5A7 615 aa6.57□□□□□ -1.36
HMGB1P49-201ENST00000418882 B3GALT1Q9Y5Z6 326 aa6.57□□□□□ -1.36
HMGB1P49-201ENST00000418882 SLC12A8A0AV02 714 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 KPNA6O60684 536 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 MMEP08473 750 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 ZNF28P17035 718 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 RPL13P26373 211 aaKnown RBP6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 GLRBP48167 497 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 PCBP1Q15365 356 aaKnown RBP eCLIP6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 VASNQ6EMK4 673 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 CNNM4Q6P4Q7 775 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 DDX53Q86TM3 631 aaKnown RBP6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 C2orf69Q8N8R5 385 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 CHST14Q8NCH0 376 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 FEZF2Q8TBJ5 459 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 TMEM209Q96SK2 561 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 INTS7Q9NVH2 962 aaKnown RBP6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 CROTQ9UKG9 612 aa6.56□□□□□ -1.36
HMGB1P49-201ENST00000418882 A0A087X0B3 334 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 PRAMEF25A6NGN4 478 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 B4E1Z4 1266 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 SMARCA5O60264 1052 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 KRT37O76014 449 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 NPTXRO95502 500 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 MPIG6BO95866 241 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 AOAHP28039 575 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 GJA4P35212 333 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 SARSP49591 514 aaKnown RBP6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 IRF9Q00978 393 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 SEPT7Q16181 437 aaKnown RBP6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 CFAP100Q494V2 611 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 CATSPEREQ5SY80 951 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 ZNF761Q86XN6 746 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 XYLT2Q9H1B5 865 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 PCDH18Q9HCL0 1135 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 DLL4Q9NR61 685 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 NTMQ9P121 344 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 ZFP69BQ9UJL9 534 aa6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 TMA7Q9Y2S6 64 aaKnown RBP6.55□□□□□ -1.36
HMGB1P49-201ENST00000418882 PTPDC1A2A3K4 754 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 OTOL1A6NHN0 477 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 ZNF891A8MT65 544 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 DDX3XO00571 662 aaKnown RBP eCLIP6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 POU3F2P20265 443 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 GYS2P54840 703 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 PKN3Q6P5Z2 889 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 STPG3Q8N7X2 389 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 ADAMTS17Q8TE56 1095 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 DDX1Q92499 740 aaKnown RBP6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 MFSD3Q96ES6 412 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 WNK4Q96J92 1243 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 CLIC6Q96NY7 704 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 BOCQ9BWV1 1114 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 LUC7LQ9NQ29 371 aaKnown RBP6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 KCNH7Q9NS40 1196 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 KCND1Q9NSA2 647 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 H2AFY2Q9P0M6 372 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 B4GALT6Q9UBX8 382 aa6.54□□□□□ -1.36
HMGB1P49-201ENST00000418882 GSG1L2A8MUP6 293 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 INHBBP09529 407 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 TMEM132BQ14DG7 1078 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 MCTP2Q6DN12 878 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 LRSAM1Q6UWE0 723 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 TTLL7Q6ZT98 887 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 NXPE1Q8N323 547 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 IGDCC4Q8TDY8 1250 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 ASB15Q8WXK1 588 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 ORAI3Q9BRQ5 295 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 TACO1Q9BSH4 297 aaKnown RBP6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 AMNQ9BXJ7 453 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 PLAAQ9Y263 795 aa6.53□□□□□ -1.36
HMGB1P49-201ENST00000418882 A0A0G2JLL6 359 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 NOBOXO60393 691 aa6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 ENO2P09104 434 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 HSD3B2P26439 372 aa6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 IL13P35225 146 aa6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 NEK4P51957 841 aa6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 FBLN7Q53RD9 439 aa6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 EP400NLQ6ZTU2 488 aa6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 ZDHHC14Q8IZN3 488 aa6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 YTHDC1Q96MU7 727 aaKnown RBP6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 PARD6AQ9NPB6 346 aa6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 UCKL1Q9NWZ5 548 aa6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 ARHGAP20Q9P2F6 1191 aa6.52□□□□□ -1.37
HMGB1P49-201ENST00000418882 FOXP2O15409 715 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 KNG1P01042 644 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 APPP05067 770 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 ATP2A2P16615 1042 aaKnown RBP6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 PTGS1P23219 599 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 SDHAP31040 664 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 KCNC1P48547 511 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 HERVK_113P62684 666 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 DSG1Q02413 1049 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 NT5DC1Q5TFE4 455 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 PRAMEF18Q5VWM3 479 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 TTLL10Q6ZVT0 673 aa6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 UBE2R2Q712K3 238 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 RTN4RL1Q86UN2 441 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P49-201ENST00000418882 TXNDC5Q8NBS9 432 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms