RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 MYH13Q9UKX3 1938 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 SPATA31A3Q5VYP0 1347 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 hCG_2014768A0A024R1R8 64 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 TRAPPC3O43617 180 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 UBOX5O94941 541 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 TRAPPC10P48553 1259 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 ZNF844Q08AG5 666 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 SEMA3FQ13275 785 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 ALKBH5Q6P6C2 394 aaKnown RBP12.73□□□□□ -0.37
DDR1-232ENST00000418800 CAPN12Q6ZSI9 719 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 ERICH1Q86X53 443 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 LMNTD2Q8IXW0 634 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 GLG1Q92896 1179 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 XPO6Q96QU8 1125 aaKnown RBP12.73□□□□□ -0.37
DDR1-232ENST00000418800 PIGSQ96S52 555 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 GFPT2O94808 682 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 EPB41P11171 864 aaKnown RBP12.73□□□□□ -0.37
DDR1-232ENST00000418800 GJC1P36383 396 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 FAM26FQ5R3K3 315 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 ARL6IP4Q66PJ3 421 aaKnown RBP12.73□□□□□ -0.37
DDR1-232ENST00000418800 SLC51AQ86UW1 340 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 RPUSD2Q8IZ73 545 aaKnown RBP12.73□□□□□ -0.37
DDR1-232ENST00000418800 REXO1Q8N1G1 1221 aaKnown RBP12.73□□□□□ -0.37
DDR1-232ENST00000418800 CAVIN3Q969G5 261 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 TRIM4Q9C037 500 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 PCDHA6Q9UN73 950 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 PCDHA8Q9Y5H6 950 aa12.73□□□□□ -0.37
DDR1-232ENST00000418800 IRF6O14896 467 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 DRP2Q13474 957 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 UBE2SQ16763 222 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 PDXDC1Q6P996 788 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 KIAA0895Q8NCT3 520 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 PIK3R5Q8WYR1 880 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 TSKSQ9UJT2 592 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 KIAA1024Q9UPX6 916 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 USH1CQ9Y6N9 552 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 MEGF6O75095 1541 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 ABCC6O95255 1503 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 SFI1A8K8P3 1242 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 PGRMC1O00264 195 aaKnown RBP12.72□□□□□ -0.37
DDR1-232ENST00000418800 DDAH1O94760 285 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 SNUPNO95149 360 aaKnown RBP12.72□□□□□ -0.37
DDR1-232ENST00000418800 TDP2O95551 362 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 SHBGP04278 402 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 GNA11P29992 359 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 MRPL12P52815 198 aaKnown RBP12.72□□□□□ -0.37
DDR1-232ENST00000418800 PLCB4Q15147 1175 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 MUM1Q2TAK8 710 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 TRPM8Q7Z2W7 1104 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDR1-232ENST00000418800 DBR1Q9UK59 544 aaKnown RBP12.72□□□□□ -0.37
DDR1-232ENST00000418800 INTUQ9ULD6 942 aa12.72□□□□□ -0.37
DDR1-232ENST00000418800 ERVV-2B6SEH9 535 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 CETN3O15182 167 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 CYP4A11Q02928 519 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 MECOMQ03112 1051 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 MEA1Q16626 185 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 YTHDF3Q7Z739 585 aaKnown RBP12.71□□□□□ -0.37
DDR1-232ENST00000418800 HOOK3Q86VS8 718 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 LRRC47Q8N1G4 583 aaKnown RBP12.71□□□□□ -0.37
DDR1-232ENST00000418800 IFT74Q96LB3 600 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.37
DDR1-232ENST00000418800 FMO2Q99518 471 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 FGFR1OP2Q9NVK5 253 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 COL4A3BPQ9Y5P4 624 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 RASSF10A6NK89 507 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 E9PMD0 336 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 KIF3CO14782 793 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 SERPING1P05155 500 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 SLC9A1P19634 815 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 ALDH5A1P51649 535 aaPredicted RBP12.71□□□□□ -0.37
DDR1-232ENST00000418800 FKBP3Q00688 224 aaKnown RBP12.71□□□□□ -0.37
DDR1-232ENST00000418800 TRIP13Q15645 432 aaPredicted RBP12.71□□□□□ -0.37
DDR1-232ENST00000418800 TBC1D10BQ4KMP7 808 aaPredicted RBP12.71□□□□□ -0.37
DDR1-232ENST00000418800 MIIPQ5JXC2 388 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 GJB7Q6PEY0 223 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 INTS8Q75QN2 995 aaKnown RBP12.71□□□□□ -0.37
DDR1-232ENST00000418800 RPGRQ92834 1020 aaKnown RBP12.71□□□□□ -0.37
DDR1-232ENST00000418800 ARHGEF2Q92974 986 aaKnown RBP12.71□□□□□ -0.37
DDR1-232ENST00000418800 ETNK1Q9HBU6 452 aa12.71□□□□□ -0.37
DDR1-232ENST00000418800 NOC2LQ9Y3T9 749 aaKnown RBP12.71□□□□□ -0.37
DDR1-232ENST00000418800 KLRC4O43908 158 aa12.71□□□□□ -0.38
DDR1-232ENST00000418800 LRRN2O75325 713 aa12.71□□□□□ -0.38
DDR1-232ENST00000418800 ACSL3O95573 720 aa12.71□□□□□ -0.38
DDR1-232ENST00000418800 ATP2A2P16615 1042 aaKnown RBP12.71□□□□□ -0.38
DDR1-232ENST00000418800 NR2F2P24468 414 aa12.71□□□□□ -0.38
DDR1-232ENST00000418800 GNAQP50148 359 aa12.71□□□□□ -0.38
DDR1-232ENST00000418800 RBM5P52756 815 aaKnown RBP eCLIP12.71□□□□□ -0.38
DDR1-232ENST00000418800 RAD23BP54727 409 aa12.71□□□□□ -0.38
DDR1-232ENST00000418800 RWDD2BP57060 319 aa12.71□□□□□ -0.38
DDR1-232ENST00000418800 WLSQ5T9L3 541 aa12.71□□□□□ -0.38
DDR1-232ENST00000418800 GPBP1Q86WP2 473 aa12.71□□□□□ -0.38
DDR1-232ENST00000418800 DCP1AQ9NPI6 582 aaPredicted RBP12.71□□□□□ -0.38
DDR1-232ENST00000418800 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.71□□□□□ -0.38
DDR1-232ENST00000418800 TMOD4Q9NZQ9 345 aa12.71□□□□□ -0.38
DDR1-232ENST00000418800 H2AFZP0C0S5 128 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 MTMR3Q13615 1198 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 IFI16Q16666 785 aaKnown RBP12.7□□□□□ -0.38
DDR1-232ENST00000418800 H2AFVQ71UI9 128 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 CCDC105Q8IYK2 499 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms