RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 AP1M1Q9BXS5 423 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 TRIM9Q9C026 710 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 FAM114A2Q9NRY5 505 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 ASB3Q9Y575 518 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 A0A1B0GUL6 1792 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 SPDYE3A6NKU9 549 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 PRKAB2O43741 272 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 CEP104O60308 925 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 FCER1AP12319 257 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 ARID4AP29374 1257 aaPredicted RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 PDE6CP51160 858 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 PSMD2Q13200 908 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 LAMB3Q13751 1172 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 DZIP3Q86Y13 1208 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.75□□□□□ -1.015e-7■■■□□ 17.7
HMGXB4-202ENST00000418170 AMACRQ9UHK6 382 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 CNTNAP5Q8WYK1 1306 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 BAZ2BQ9UIF8 2168 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 BTNL10A8MVZ5 291 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 CNGA1P29973 690 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 NLRP5P59047 1200 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 IFIT5Q13325 482 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 LBRQ14739 615 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 HLFQ16534 295 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 SGSM1Q2NKQ1 1148 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 CMPK2Q5EBM0 449 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 TMTC3Q6ZXV5 915 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 KIF2BQ8N4N8 673 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 MAGEB6Q8N7X4 407 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 ENAHQ8N8S7 591 aaPredicted RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 PROCA1Q8NCQ7 364 aaPredicted RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 RGL1Q9NZL6 768 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 ATP8A1Q9Y2Q0 1164 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 NOC2LQ9Y3T9 749 aaKnown RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 ATP6V0A2Q9Y487 856 aa8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 USP15Q9Y4E8 981 aaPredicted RBP8.75□□□□□ -1.01
HMGXB4-202ENST00000418170 DLEC1Q9Y238 1755 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 UPP2O95045 317 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 ZBTB48P10074 688 aaPredicted RBP8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 GNAT2P19087 354 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 MXRA7P84157 204 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 SFMBT2Q5VUG0 894 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 CATIPQ7Z7H3 387 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 KIAA0895Q8NCT3 520 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 TEKT4Q8WW24 435 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 EZH1Q92800 747 aaPredicted RBP8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 CCDC85AQ96PX6 553 aaPredicted RBP8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 FMO2Q99518 471 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 PLIN2Q99541 437 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 EPB41L4BQ9H329 900 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 ZBTB3Q9H5J0 574 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 CEP72Q9P209 647 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 STK38LQ9Y2H1 464 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 SLIT2O94813 1529 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 CCDC88AQ3V6T2 1871 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 KRIT1O00522 736 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 ADAMTS3O15072 1205 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 TTI1O43156 1089 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 SHBGP04278 402 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 GNAZP19086 355 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 PHKA1P46020 1223 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 TROAPQ12815 778 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 PLS1Q14651 629 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 RPUSD2Q8IZ73 545 aaKnown RBP8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 TBC1D5Q92609 795 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 ESR2Q92731 530 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 C7orf25Q9BPX7 421 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 PACSIN1Q9BY11 444 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 A0A087X0T9 212 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 CCDC169A6NNP5 214 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 CSF1RP07333 972 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 FAM228BP0C875 321 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 ASIC1P78348 528 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 KCNMA1Q12791 1236 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 TRIM68Q6AZZ1 485 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 CNNM4Q6P4Q7 775 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 TTLL11Q8NHH1 800 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 CABLES1Q8TDN4 633 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 NLRC4Q9NPP4 1024 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 UTP11Q9Y3A2 253 aaKnown RBP8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 CD2APQ9Y5K6 639 aa8.74□□□□□ -1.01
HMGXB4-202ENST00000418170 PNPLA7Q6ZV29 1317 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 TNS2Q63HR2 1409 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 SPDYE5A6NIY4 337 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 HIP1RO75146 1068 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 FGFR1OPO95684 399 aaKnown RBP8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 UQCRFS1P1P0C7P4 283 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 CALM1P0DP23 149 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 CALM2P0DP24 149 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 CALM3P0DP25 149 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 SCG2P13521 617 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 LMNTD2Q8IXW0 634 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 VGLL2Q8N8G2 317 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 CNBD1Q8NA66 436 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 KCNV2Q8TDN2 545 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 RAPGEF4Q8WZA2 1011 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 PABPC3Q9H361 631 aaKnown RBP8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 GGT7Q9UJ14 662 aa8.73□□□□□ -1.01
HMGXB4-202ENST00000418170 EIF4E1BA6NMX2 242 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms