RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 FER1L4A9Z1Z3 1794 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 PPLO60437 1756 aa5.24□□□□□ -1.57
HMGB3P20-201ENST00000417997 PIK3C2BO00750 1634 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 KIAA1210Q9ULL0 1709 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 MYO5BQ9ULV0 1848 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 CCDC85CA6NKD9 419 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 DLX3O60479 287 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 CELA3BP08861 270 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 ZC3H6P61129 1189 aaKnown RBP5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 NKX3-2P78367 333 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 MAP4K2Q12851 820 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 RAB33AQ14088 237 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 NAALADL2Q58DX5 795 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 GGT6Q6P531 493 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 CKAP2LQ8IYA6 745 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 Q8N1Y9 231 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 KYQ8NBH2 561 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 JAM3Q9BX67 310 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 EPB41L1Q9H4G0 881 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 UGGT1Q9NYU2 1555 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 ADGRB3O60242 1522 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 CNTLNQ9NXG0 1405 aa5.23□□□□□ -1.57
HMGB3P20-201ENST00000417997 SYNMO15061 1565 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 PLA2R1Q13018 1463 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 PRICKLE3O43900 615 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 CNR2P34972 360 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 THBS2P35442 1172 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 ITGA1P56199 1179 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 PLP2Q04941 152 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 RTP5Q14D33 572 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 TESK1Q15569 626 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 NSMFQ6X4W1 530 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 TTLL6Q8N841 843 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 LINC00482Q8N8I6 264 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 ARRDC4Q8NCT1 418 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 TOE1Q96GM8 510 aaKnown RBP5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 SGSM3Q96HU1 749 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 KCNJ15Q99712 375 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 NGRNQ9NPE2 291 aaKnown RBP5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 ARHGEF4Q9NR80 690 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 GPR27Q9NS67 375 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 MYOTQ9UBF9 498 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 PPARGC1AQ9UBK2 798 aaKnown RBP5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 ZNF652Q9Y2D9 606 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 PTPRTO14522 1441 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 NPATQ14207 1427 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 UHRF1BP1Q6BDS2 1440 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 WASHC2CQ9Y4E1 1318 aa5.22□□□□□ -1.57
HMGB3P20-201ENST00000417997 IQGAP1P46940 1657 aa5.21□□□□□ -1.57
HMGB3P20-201ENST00000417997 TRAV20A0A0B4J274 112 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 TCRBV5S2A0A599 114 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 BLACEA4D250 179 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 KRIT1O00522 736 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 NOBOXO60393 691 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 MSCO60682 206 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 PABPC1P11940 636 aaKnown RBP5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 IFRD2Q12894 506 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 PRAMEF18Q5VWM3 479 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 MCTP2Q6DN12 878 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 KCNT2Q6UVM3 1135 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 PRRT2Q7Z6L0 340 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 ZNF761Q86XN6 746 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 LRRC47Q8N1G4 583 aaKnown RBP5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 ADAMTS17Q8TE56 1095 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 ZSWIM3Q96MP5 696 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 TANGO6Q9C0B7 1094 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 IGSF5Q9NSI5 407 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 NPFFR2Q9Y5X5 522 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 PRAG1Q86YV5 1406 aa5.21□□□□□ -1.58
HMGB3P20-201ENST00000417997 MYOM2P54296 1465 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 DDX3XO00571 662 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 MAFKO60675 156 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 CAPNS1P04632 268 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 ATP2B1P20020 1258 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 RPL13P26373 211 aaKnown RBP5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 GRIN1Q05586 938 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 CR1LQ2VPA4 569 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 SKOR2Q2VWA4 1001 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 RGL3Q3MIN7 710 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 YOD1Q5VVQ6 348 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 FAM124AQ86V42 546 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 ST13P5Q8NFI4 369 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 PIP4K2CQ8TBX8 421 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 DCAF4Q8WV16 495 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 DTLQ9NZJ0 730 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 PFDN2Q9UHV9 154 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 CROTQ9UKG9 612 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 ARHGAP31Q2M1Z3 1444 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 SPATA31E1Q6ZUB1 1445 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 ERVK-7P63135 1459 aa5.2□□□□□ -1.58
HMGB3P20-201ENST00000417997 ROCK2O75116 1388 aaKnown RBP5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 USP47Q96K76 1375 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 SLC27A2O14975 620 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 TADA3O75528 432 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 FGFR1P11362 822 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 GNAT1P11488 350 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 COL6A2P12110 1019 aa5.19□□□□□ -1.58
HMGB3P20-201ENST00000417997 GRK2P25098 689 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms