RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 MT-CO1P00395 513 aa6.84□□□□□ -1.31
RFC4-204ENST00000417876 CYBBP04839 570 aa6.84□□□□□ -1.31
RFC4-204ENST00000417876 TMEM253P0C7T8 217 aa6.84□□□□□ -1.31
RFC4-204ENST00000417876 THBS2P35442 1172 aa6.84□□□□□ -1.31
RFC4-204ENST00000417876 SCAND1P57086 179 aa6.84□□□□□ -1.31
RFC4-204ENST00000417876 KLF1Q13351 362 aaPredicted RBP6.84□□□□□ -1.31
RFC4-204ENST00000417876 PCBP2Q15366 365 aaKnown RBP eCLIP6.84□□□□□ -1.31
RFC4-204ENST00000417876 PTPN21Q16825 1174 aa6.84□□□□□ -1.31
RFC4-204ENST00000417876 PAQR3Q6TCH7 311 aa6.84□□□□□ -1.31
RFC4-204ENST00000417876 NOL8Q76FK4 1167 aaKnown RBP6.84□□□□□ -1.31
RFC4-204ENST00000417876 PHOSPHO1Q8TCT1 267 aa6.84□□□□□ -1.31
RFC4-204ENST00000417876 RTF1Q92541 710 aaKnown RBP6.84□□□□□ -1.31
RFC4-204ENST00000417876 FUBP3Q96I24 572 aaKnown RBP eCLIP6.84□□□□□ -1.31
RFC4-204ENST00000417876 ZNF496Q96IT1 587 aaPredicted RBP6.84□□□□□ -1.31
RFC4-204ENST00000417876 SCYL1Q96KG9 808 aa6.84□□□□□ -1.31
RFC4-204ENST00000417876 ACSS2Q9NR19 701 aa6.84□□□□□ -1.31
RFC4-204ENST00000417876 ZIM2Q9NZV7 527 aa6.84□□□□□ -1.31
RFC4-204ENST00000417876 NUDT19A8MXV4 375 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 TSPAN6O43657 245 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 MAFKO60675 156 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 MYBL2P10244 700 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 RAC2P15153 192 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 SDHAP31040 664 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 LSP1P33241 339 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 ARL4AP40617 200 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 GPR3P46089 330 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 PRR5P85299 388 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 RBM10P98175 930 aaKnown RBP6.83□□□□□ -1.32
RFC4-204ENST00000417876 FAPQ12884 760 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 LRRC32Q14392 662 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 GPR158Q5T848 1215 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 RPTNQ6XPR3 784 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 PASD1Q8IV76 773 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 C1orf162Q8NEQ5 155 aaPredicted RBP6.83□□□□□ -1.32
RFC4-204ENST00000417876 LMBR1Q8WVP7 490 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 CHMP4CQ96CF2 233 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 ZDHHC5Q9C0B5 715 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 AP5M1Q9H0R1 490 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 AASDHPPTQ9NRN7 309 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 KLHL14Q9P2G3 628 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 TCEAL9Q9UHQ7 104 aa6.83□□□□□ -1.32
RFC4-204ENST00000417876 PCDHGA12O60330 932 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 H2AFYO75367 372 aaKnown RBP6.82□□□□□ -1.32
RFC4-204ENST00000417876 SCGB1D2O95969 90 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 CYP17A1P05093 508 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 MMEP08473 750 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 ODF1Q14990 250 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 PPP2R5AQ15172 486 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 PAN2Q504Q3 1202 aaKnown RBP6.82□□□□□ -1.32
RFC4-204ENST00000417876 ZBTB46Q86UZ6 589 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 FLAD1Q8NFF5 587 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 ASB15Q8WXK1 588 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 FOXRED1Q96CU9 486 aaPredicted RBP6.82□□□□□ -1.32
RFC4-204ENST00000417876 PEX11GQ96HA9 241 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 FAXDC2Q96IV6 333 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 CDH19Q9H159 772 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 NOC2LQ9Y3T9 749 aaKnown RBP6.82□□□□□ -1.32
RFC4-204ENST00000417876 SPEF1Q9Y4P9 236 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 PCDHGA9Q9Y5G4 932 aaKnown RBP6.82□□□□□ -1.32
RFC4-204ENST00000417876 PCDHGA8Q9Y5G5 932 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 PCDHGA7Q9Y5G6 932 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 PCDHGA6Q9Y5G7 932 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 PCDHGA3Q9Y5H0 932 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 PCDHGA2Q9Y5H1 932 aa6.82□□□□□ -1.32
RFC4-204ENST00000417876 PRAMEF25A6NGN4 478 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 FOXP2O15409 715 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 ABLIM3O94929 683 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 FAHP16930 419 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 GJA4P35212 333 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 PIN1Q13526 163 aaPredicted RBP6.81□□□□□ -1.32
RFC4-204ENST00000417876 MOGSQ13724 837 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 ZMYM1Q5SVZ6 1142 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 ADGRF1Q5T601 910 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 TRIM48Q8IWZ4 208 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 RHOBTB2Q9BYZ6 727 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 WASF3Q9UPY6 502 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 NUB1Q9Y5A7 615 aa6.81□□□□□ -1.32
RFC4-204ENST00000417876 GOLGA8AA7E2F4 631 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 GOLGA8BA8MQT2 603 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 PRPF3O43395 683 aaKnown RBP6.8□□□□□ -1.32
RFC4-204ENST00000417876 KDM1AO60341 852 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 LRG1P02750 347 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 MPOP05164 745 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 AFMP43652 599 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 LRP8Q14114 963 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 RAB3GAP1Q15042 981 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 EPHA7Q15375 998 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 PGM2L1Q6PCE3 622 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 FRMD7Q6ZUT3 714 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 RTN4RL1Q86UN2 441 aaPredicted RBP6.8□□□□□ -1.32
RFC4-204ENST00000417876 TTLL11Q8NHH1 800 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 TGFBRAP1Q8WUH2 860 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 TSPAN17Q96FV3 270 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 INTS4Q96HW7 963 aaKnown RBP6.8□□□□□ -1.32
RFC4-204ENST00000417876 KIRREL1Q96J84 757 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 BTBD7Q9P203 1132 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 RBPJLQ9UBG7 517 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 MSRAQ9UJ68 235 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 NUDT5Q9UKK9 219 aa6.8□□□□□ -1.32
RFC4-204ENST00000417876 GOLGA6L22H0YM25 854 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms