RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SWSAP1Q6NVH7 229 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 POTEGQ6S5H5 508 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 CCDC73Q6ZRK6 1079 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 CABP7Q86V35 215 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 TPH2Q8IWU9 490 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 C4orf32Q8N8J7 132 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 BANK1Q8NDB2 785 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 DYDC2Q96IM9 177 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 CLIC6Q96NY7 704 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 GPR20Q99678 358 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 EIF2AK1Q9BQI3 630 aaKnown RBP9.49□□□□□ -0.89
TRIM48-201ENST00000417545 NT5C3AQ9H0P0 336 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 SMARCAD1Q9H4L7 1026 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 GABBR1Q9UBS5 961 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 FBXO2Q9UK22 296 aaPredicted RBP9.49□□□□□ -0.89
TRIM48-201ENST00000417545 RCOR1Q9UKL0 485 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 VAV3Q9UKW4 847 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 PCDHA7Q9UN72 937 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 TRPC6Q9Y210 931 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 WDR81Q562E7 1941 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 DHX15O43143 795 aaKnown RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 PPFIA4O75335 1185 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 CCNE2O96020 404 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 IGHA2P01877 340 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 LGALS2P05162 132 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 P4HBP07237 508 aaKnown RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 ZNF286BP0CG31 522 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 PTGS1P23219 599 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 MARK3P27448 753 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 QARSP47897 775 aaKnown RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 STAT5BP51692 787 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 PSMC5P62195 406 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 LRRC41Q15345 812 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 SPECC1Q5M775 1068 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 IGSF22Q8N9C0 903 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 U2AF1L4Q8WU68 220 aaKnown RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 SYMPKQ92797 1274 aaKnown RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 CCDC34Q96HJ3 373 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 FAM167AQ96KS9 214 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 GLT1D1Q96MS3 346 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 PYM1Q9BRP8 204 aaKnown RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 LXNQ9BS40 222 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 MTG1Q9BT17 334 aaPredicted RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 UPF3AQ9H1J1 476 aaKnown RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 BCAS3Q9H6U6 928 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 ZSWIM4Q9H7M6 989 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 TUFT1Q9NNX1 390 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 PAK6Q9NQU5 681 aaPredicted RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 ERAP1Q9NZ08 941 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 SEPT9Q9UHD8 586 aaPredicted RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 MORC2Q9Y6X9 1032 aaPredicted RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 EMSYQ7Z589 1322 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 GSTTP1A0A1W2PQM5 241 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 MOXD2PA6NHM9 499 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 A6NJR5 290 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 PP2D1A8MPX8 630 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 EML1O00423 815 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 PRPF40AO75400 957 aaKnown RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 CABYRO75952 493 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 SGPL1O95470 568 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 SSBP05455 408 aaKnown RBP eCLIP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 ASGR1P07306 291 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 GJB1P08034 283 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 PTMSP20962 102 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 STAT6P42226 847 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 CTTNQ14247 550 aaKnown RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 KCNA10Q16322 511 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 FAM47CQ5HY64 1035 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 ADALQ6DHV7 355 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 ABHD15Q6UXT9 468 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 OTUD6AQ7L8S5 288 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 FSIP1Q8NA03 581 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 MRPS27Q92552 414 aaKnown RBP9.48□□□□□ -0.89
TRIM48-201ENST00000417545 NRBP2Q9NSY0 501 aa9.48□□□□□ -0.89
TRIM48-201ENST00000417545 POTEB3A0JP26 581 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 MYADML2A6NDP7 307 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 DDX11L8A8MPP1 907 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 H3BRB1 525 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 DNM1LO00429 736 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 SLC26A4O43511 780 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 ADAMTS4O75173 837 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 CAPN2P17655 700 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 RPA1P27694 616 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 CST5P28325 142 aaPredicted RBP9.47□□□□□ -0.89
TRIM48-201ENST00000417545 CDC25AP30304 524 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 PSEN2P49810 448 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 SLC26A2P50443 739 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 PRKCEQ02156 737 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 GRIN1Q05586 938 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 SPIRE1Q08AE8 756 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 MFSD10Q14728 455 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 RRAGBQ5VZM2 374 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 POTEBQ6S5H4 581 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 CXCL17Q6UXB2 119 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 TRIM50Q86XT4 487 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 CCDC60Q8IWA6 550 aaPredicted RBP9.47□□□□□ -0.89
TRIM48-201ENST00000417545 CEP57L1Q8IYX8 460 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 TNS4Q8IZW8 715 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 PDILTQ8N807 584 aa9.47□□□□□ -0.89
TRIM48-201ENST00000417545 C7orf31Q8N865 590 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms