RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 PDGFBP01127 241 aaPredicted RBP15.92■□□□□ 0.14
SSB-204ENST00000417292 POLR2MP0CAP2 368 aa15.92■□□□□ 0.14
SSB-204ENST00000417292 PDE1AP54750 535 aa15.92■□□□□ 0.14
SSB-204ENST00000417292 NEDD9Q14511 834 aa15.92■□□□□ 0.14
SSB-204ENST00000417292 NAALADL2Q58DX5 795 aa15.92■□□□□ 0.14
SSB-204ENST00000417292 CMTR2Q8IYT2 770 aaKnown RBP15.92■□□□□ 0.14
SSB-204ENST00000417292 VN1R2Q8NFZ6 395 aa15.92■□□□□ 0.14
SSB-204ENST00000417292 SUSD6Q92537 303 aa15.92■□□□□ 0.14
SSB-204ENST00000417292 RWDD1Q9H446 243 aaPredicted RBP15.92■□□□□ 0.14
SSB-204ENST00000417292 RTEL1Q9NZ71 1219 aa15.92■□□□□ 0.14
SSB-204ENST00000417292 ZBTB47Q9UFB7 747 aaPredicted RBP15.92■□□□□ 0.14
SSB-204ENST00000417292 RIF1Q5UIP0 2472 aaKnown RBP15.92■□□□□ 0.14
SSB-204ENST00000417292 LAMA4Q16363 1823 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 PER2O15055 1255 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 CD52P31358 61 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 NT5C2P49902 561 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 SP4Q02446 784 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 AAMPQ13685 434 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 PTPN21Q16825 1174 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 GNPTABQ3T906 1256 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 PAN2Q504Q3 1202 aaKnown RBP15.91■□□□□ 0.14
SSB-204ENST00000417292 TAF2Q6P1X5 1199 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 TSHZ1Q6ZSZ6 1077 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 ASCL5Q7RTU5 278 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 DNAJB3Q8WWF6 145 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 IRF2BPLQ9H1B7 796 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 MAD2L2Q9UI95 211 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 DMXL1Q9Y485 3027 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 FRMPD4Q14CM0 1322 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 PLXNA4Q9HCM2 1894 aa15.91■□□□□ 0.14
SSB-204ENST00000417292 PROB1E7EW31 1015 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 FIBPO43427 364 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 ATF7P17544 494 aaPredicted RBP15.9■□□□□ 0.14
SSB-204ENST00000417292 GATMP50440 423 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 MARCH8Q5T0T0 291 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 TICAM2Q86XR7 235 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 HOMER1Q86YM7 354 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 ATP8B4Q8TF62 1192 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 ZBTB10Q96DT7 871 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 LNPKQ9C0E8 428 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 TLE6Q9H808 572 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 CDY2AQ9Y6F7 541 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 KAT6AQ92794 2004 aa15.9■□□□□ 0.14
SSB-204ENST00000417292 PALM3A6NDB9 673 aaPredicted RBP15.89■□□□□ 0.13
SSB-204ENST00000417292 PPFIA3O75145 1194 aa15.89■□□□□ 0.13
SSB-204ENST00000417292 PPFIA1Q13136 1202 aa15.89■□□□□ 0.13
SSB-204ENST00000417292 NPAS4Q8IUM7 802 aa15.89■□□□□ 0.13
SSB-204ENST00000417292 PIGSQ96S52 555 aa15.89■□□□□ 0.13
SSB-204ENST00000417292 TUBE1Q9UJT0 475 aa15.89■□□□□ 0.13
SSB-204ENST00000417292 FRYLO94915 3013 aa15.89■□□□□ 0.13
SSB-204ENST00000417292 CACNA1AO00555 2505 aa15.89■□□□□ 0.13
SSB-204ENST00000417292 MBLAC1A4D2B0 266 aaPredicted RBP15.88■□□□□ 0.13
SSB-204ENST00000417292 STAM2O75886 525 aa15.88■□□□□ 0.13
SSB-204ENST00000417292 TCF7P36402 384 aaPredicted RBP15.88■□□□□ 0.13
SSB-204ENST00000417292 GRIK4Q16099 956 aa15.88■□□□□ 0.13
SSB-204ENST00000417292 IFIT1BQ5T764 474 aaKnown RBP15.88■□□□□ 0.13
SSB-204ENST00000417292 RSPH3Q86UC2 560 aa15.88■□□□□ 0.13
SSB-204ENST00000417292 SMC5Q8IY18 1101 aa15.88■□□□□ 0.13
SSB-204ENST00000417292 RIPOR3Q96MK2 946 aa15.88■□□□□ 0.13
SSB-204ENST00000417292 SENP7Q9BQF6 1050 aa15.88■□□□□ 0.13
SSB-204ENST00000417292 DNAH14Q0VDD8 3507 aa15.88■□□□□ 0.13
SSB-204ENST00000417292 FAM186AA6NE01 2351 aa15.87■□□□□ 0.13
SSB-204ENST00000417292 GALR2O43603 387 aaPredicted RBP15.87■□□□□ 0.13
SSB-204ENST00000417292 CYTH3O43739 400 aa15.87■□□□□ 0.13
SSB-204ENST00000417292 MARK3P27448 753 aa15.87■□□□□ 0.13
SSB-204ENST00000417292 MRPS6P82932 125 aaKnown RBP15.87■□□□□ 0.13
SSB-204ENST00000417292 SEC23AQ15436 765 aa15.87■□□□□ 0.13
SSB-204ENST00000417292 DUSP6Q16828 381 aa15.87■□□□□ 0.13
SSB-204ENST00000417292 MICAL1Q8TDZ2 1067 aa15.87■□□□□ 0.13
SSB-204ENST00000417292 UBAC1Q9BSL1 405 aa15.87■□□□□ 0.13
SSB-204ENST00000417292 S1PR5Q9H228 398 aa15.87■□□□□ 0.13
SSB-204ENST00000417292 RIOX1Q9H6W3 641 aa15.87■□□□□ 0.13
SSB-204ENST00000417292 BAZ2BQ9UIF8 2168 aaKnown RBP15.87■□□□□ 0.13
SSB-204ENST00000417292 GSTTP1A0A1W2PQM5 241 aa15.86■□□□□ 0.13
SSB-204ENST00000417292 PRR23AA6NEV1 266 aa15.86■□□□□ 0.13
SSB-204ENST00000417292 ATP9AO75110 1047 aa15.86■□□□□ 0.13
SSB-204ENST00000417292 SDSP20132 328 aa15.86■□□□□ 0.13
SSB-204ENST00000417292 NUBP1P53384 320 aa15.86■□□□□ 0.13
SSB-204ENST00000417292 MFAP1P55081 439 aaKnown RBP15.86■□□□□ 0.13
SSB-204ENST00000417292 ERVFC1P60507 584 aa15.86■□□□□ 0.13
SSB-204ENST00000417292 KCNC3Q14003 757 aa15.86■□□□□ 0.13
SSB-204ENST00000417292 RILPL2Q969X0 211 aa15.86■□□□□ 0.13
SSB-204ENST00000417292 FTHL17Q9BXU8 183 aa15.86■□□□□ 0.13
SSB-204ENST00000417292 FAM49AQ9H0Q0 323 aaPredicted RBP15.86■□□□□ 0.13
SSB-204ENST00000417292 PADI3Q9ULW8 664 aa15.86■□□□□ 0.13
SSB-204ENST00000417292 STAG3L1P0CL83 205 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 SCG2P13521 617 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 SP100P23497 879 aaPredicted RBP15.85■□□□□ 0.13
SSB-204ENST00000417292 NBL1P41271 181 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 IGBP1P78318 339 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 TMEM62Q0P6H9 643 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 PCNX4Q63HM2 1172 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 CHD1LQ86WJ1 897 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 TMEM105Q8N8V8 129 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 NEK1Q96PY6 1258 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 KRT23Q9C075 422 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 TMX1Q9H3N1 280 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 ERAP1Q9NZ08 941 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 HCSTQ9UBK5 93 aa15.85■□□□□ 0.13
SSB-204ENST00000417292 TRPC6Q9Y210 931 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms