RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 SPC24Q8NBT2 197 aa18.91■□□□□ 0.62
CALD1-204ENST00000417172 REEP2Q9BRK0 252 aa18.91■□□□□ 0.62
CALD1-204ENST00000417172 PVALEFA0A1B0GWK0 134 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 MAFGO15525 162 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 P4HBP07237 508 aaKnown RBP18.9■□□□□ 0.62
CALD1-204ENST00000417172 ADORA2AP29274 412 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 CCNA1P78396 465 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 KRT76Q01546 638 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 GIT2Q14161 759 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 LRRC41Q15345 812 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 CYFIP1Q7L576 1253 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 CCDC47Q96A33 483 aaKnown RBP18.9■□□□□ 0.62
CALD1-204ENST00000417172 LRRC27Q9C0I9 530 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 ZHX3Q9H4I2 956 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 JPH1Q9HDC5 661 aaPredicted RBP18.9■□□□□ 0.62
CALD1-204ENST00000417172 TCEAL9Q9UHQ7 104 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 ARID2Q68CP9 1835 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 WDR64B1ANS9 1081 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 RINT1Q6NUQ1 792 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 FBXO16Q8IX29 292 aaPredicted RBP18.9■□□□□ 0.62
CALD1-204ENST00000417172 SMC1BQ8NDV3 1235 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 IFNKQ9P0W0 207 aa18.9■□□□□ 0.62
CALD1-204ENST00000417172 MANSC4A6NHS7 340 aaPredicted RBP18.89■□□□□ 0.61
CALD1-204ENST00000417172 ARIH2O95376 493 aa18.89■□□□□ 0.61
CALD1-204ENST00000417172 ZNF18P17022 549 aa18.89■□□□□ 0.61
CALD1-204ENST00000417172 UBA1P22314 1058 aaKnown RBP18.89■□□□□ 0.61
CALD1-204ENST00000417172 PTGS1P23219 599 aa18.89■□□□□ 0.61
CALD1-204ENST00000417172 ICAM3P32942 547 aa18.89■□□□□ 0.61
CALD1-204ENST00000417172 QARSP47897 775 aaKnown RBP18.89■□□□□ 0.61
CALD1-204ENST00000417172 TPM4P67936 248 aa18.89■□□□□ 0.61
CALD1-204ENST00000417172 FANCCQ00597 558 aa18.89■□□□□ 0.61
CALD1-204ENST00000417172 ZNF746Q6NUN9 644 aaPredicted RBP18.89■□□□□ 0.61
CALD1-204ENST00000417172 CDHR1Q96JP9 859 aa18.89■□□□□ 0.61
CALD1-204ENST00000417172 NACC1Q96RE7 527 aa18.89■□□□□ 0.61
CALD1-204ENST00000417172 BMP2KQ9NSY1 1161 aaPredicted RBP18.89■□□□□ 0.61
CALD1-204ENST00000417172 SLC9A2Q9UBY0 812 aa18.89■□□□□ 0.61
CALD1-204ENST00000417172 RWDD2AQ9UIY3 292 aa18.89■□□□□ 0.61
CALD1-204ENST00000417172 NFASCO94856 1347 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 ADGRA2Q96PE1 1338 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 JAK3P52333 1124 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 TAF1CQ15572 869 aaPredicted RBP18.88■□□□□ 0.61
CALD1-204ENST00000417172 PTPN21Q16825 1174 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 FAM110CQ1W6H9 321 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 TMEM63BQ5T3F8 832 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 SPATA1Q5VX52 437 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 GPR142Q7Z601 462 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 NEK9Q8TD19 979 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 EEF2KMTQ96G04 330 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 XPO4Q9C0E2 1151 aaKnown RBP18.88■□□□□ 0.61
CALD1-204ENST00000417172 ZSWIM4Q9H7M6 989 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 SFI1A8K8P3 1242 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 ACTR2P61160 394 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 LY6KQ17RY6 165 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 UTP14CQ5TAP6 766 aaKnown RBP18.88■□□□□ 0.61
CALD1-204ENST00000417172 C1orf186Q6ZWK4 172 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 IFNL1Q8IU54 200 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 PCDHA2Q9Y5H9 948 aa18.88■□□□□ 0.61
CALD1-204ENST00000417172 FRMD3A2A2Y4 597 aa18.87■□□□□ 0.61
CALD1-204ENST00000417172 MUTP22033 750 aa18.87■□□□□ 0.61
CALD1-204ENST00000417172 SFNP31947 248 aa18.87■□□□□ 0.61
CALD1-204ENST00000417172 HERC4Q5GLZ8 1057 aaPredicted RBP18.87■□□□□ 0.61
CALD1-204ENST00000417172 CT47A1Q5JQC4 288 aaPredicted RBP18.87■□□□□ 0.61
CALD1-204ENST00000417172 FAM26FQ5R3K3 315 aa18.87■□□□□ 0.61
CALD1-204ENST00000417172 PLA2G4FQ68DD2 849 aa18.87■□□□□ 0.61
CALD1-204ENST00000417172 SFR1Q86XK3 245 aa18.87■□□□□ 0.61
CALD1-204ENST00000417172 CCDC60Q8IWA6 550 aaPredicted RBP18.87■□□□□ 0.61
CALD1-204ENST00000417172 CCDC65Q8IXS2 484 aa18.87■□□□□ 0.61
CALD1-204ENST00000417172 SENP7Q9BQF6 1050 aa18.87■□□□□ 0.61
CALD1-204ENST00000417172 GABBR1Q9UBS5 961 aa18.87■□□□□ 0.61
CALD1-204ENST00000417172 PCDHA10Q9Y5I2 948 aa18.87■□□□□ 0.61
CALD1-204ENST00000417172 CENPFP49454 3210 aa18.87■□□□□ 0.61
CALD1-204ENST00000417172 PSMA7O14818 248 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 ZNF862O60290 1169 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 CASP5P51878 434 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 ZNF792Q3KQV3 632 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 SWSAP1Q6NVH7 229 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 PAXIP1Q6ZW49 1069 aaPredicted RBP18.86■□□□□ 0.61
CALD1-204ENST00000417172 NAP1L5Q96NT1 182 aaPredicted RBP18.86■□□□□ 0.61
CALD1-204ENST00000417172 PDGFCQ9NRA1 345 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 IVNS1ABPQ9Y6Y0 642 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 ARHGEF35A5YM69 484 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 YWHABP31946 246 aaKnown RBP18.86■□□□□ 0.61
CALD1-204ENST00000417172 PSMC5P62195 406 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 STIM1Q13586 685 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 ANKRD40Q6AI12 368 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 TTI2Q6NXR4 508 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 ARMCX2Q7L311 632 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 MAEAQ7L5Y9 396 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 SEMA6BQ9H3T3 888 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 NRBP1Q9UHY1 535 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 ZSWIM8A7E2V4 1837 aa18.86■□□□□ 0.61
CALD1-204ENST00000417172 TMEM88BA6NKF7 163 aa18.85■□□□□ 0.61
CALD1-204ENST00000417172 BACH1O14867 736 aa18.85■□□□□ 0.61
CALD1-204ENST00000417172 FARP2O94887 1054 aaPredicted RBP18.85■□□□□ 0.61
CALD1-204ENST00000417172 SERPINC1P01008 464 aa18.85■□□□□ 0.61
CALD1-204ENST00000417172 RARRES1P49788 294 aa18.85■□□□□ 0.61
CALD1-204ENST00000417172 NPEPPSP55786 919 aa18.85■□□□□ 0.61
CALD1-204ENST00000417172 TPD52L1Q16890 204 aaPredicted RBP18.85■□□□□ 0.61
CALD1-204ENST00000417172 CDKAL1Q5VV42 579 aa18.85■□□□□ 0.61
CALD1-204ENST00000417172 CYP4F22Q6NT55 531 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms