RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 TCTN1Q2MV58 587 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 PRR16Q569H4 304 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 PLPPR4Q7Z2D5 763 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 FAM177A1Q8N128 213 aaPredicted RBP17.75■□□□□ 0.43
ITGB1-204ENST00000417122 TNPO1Q92973 898 aaKnown RBP17.75■□□□□ 0.43
ITGB1-204ENST00000417122 UIMC1Q96RL1 719 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 C22orf23Q9BZE7 217 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 TUBE1Q9UJT0 475 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 ABHD14A-ACY1A0A1B0GW23 586 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 INSRRP14616 1297 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 USP11P51784 963 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 IGBP1P78318 339 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 IKBKEQ14164 716 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 PLCB4Q15147 1175 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 GALNT17Q6IS24 598 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 TAF2Q6P1X5 1199 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 ABHD15Q6UXT9 468 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 HERC6Q8IVU3 1022 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 BLIDQ8IZY5 108 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 DAGLBQ8NCG7 672 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 TBCKQ8TEA7 893 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 TBC1D22BQ9NU19 505 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 TRPC6Q9Y210 931 aa17.74■□□□□ 0.43
ITGB1-204ENST00000417122 STK36Q9NRP7 1315 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 IGKV6D-21A0A0A0MT36 114 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 MBLAC1A4D2B0 266 aaPredicted RBP17.73■□□□□ 0.43
ITGB1-204ENST00000417122 RRN3P2A6NIE6 340 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 KIF28PB7ZC32 967 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 RBAK-RBAKDNI3L0D1 243 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 M0R2N6 131 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 EDIL3O43854 480 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 EFCAB14O75071 495 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 SLC26A2P50443 739 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 NEK4P51957 841 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 NPY5RQ15761 445 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 FAM26DQ5JW98 314 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 MARCH8Q5T0T0 291 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 FAM160B1Q5W0V3 765 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 PPP2R2DQ66LE6 453 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 MIS18BP1Q6P0N0 1132 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 RUFY4Q6ZNE9 571 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 RPAINQ86UA6 219 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 SLC17A8Q8NDX2 589 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 DBF4BQ8NFT6 615 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 LENG9Q96B70 501 aa17.73■□□□□ 0.43
ITGB1-204ENST00000417122 POTEB3A0JP26 581 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 BACH1O14867 736 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 DEFB103AP81534 67 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 ME3Q16798 604 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 PLEKHG4Q58EX7 1191 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 ZNF746Q6NUN9 644 aaPredicted RBP17.72■□□□□ 0.43
ITGB1-204ENST00000417122 POTEBQ6S5H4 581 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 RSPH3Q86UC2 560 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 OSBPL7Q9BZF2 842 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 PRDM12Q9H4Q4 367 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 ZNF302Q9NR11 478 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 TCEAL9Q9UHQ7 104 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 KCNJ14Q9UNX9 436 aa17.72■□□□□ 0.43
ITGB1-204ENST00000417122 MICAL3Q7RTP6 2002 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 SIP14410 1827 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 DTNBO60941 627 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 CTDNEP1O95476 244 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 CA3P07451 260 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 XBP1P17861 261 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 KRT76Q01546 638 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 SWSAP1Q6NVH7 229 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 CCDC60Q8IWA6 550 aaPredicted RBP17.71■□□□□ 0.43
ITGB1-204ENST00000417122 SMAP1Q8IYB5 467 aaPredicted RBP17.71■□□□□ 0.43
ITGB1-204ENST00000417122 NECAB1Q8N987 351 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 MAFAQ8NHW3 353 aaPredicted RBP17.71■□□□□ 0.43
ITGB1-204ENST00000417122 DNAJB3Q8WWF6 145 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 SEPT8Q92599 483 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 GAS2L1Q99501 681 aaPredicted RBP17.71■□□□□ 0.43
ITGB1-204ENST00000417122 PHF20Q9BVI0 1012 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 COL6A3P12111 3177 aa17.71■□□□□ 0.43
ITGB1-204ENST00000417122 MYH9P35579 1960 aaKnown RBP17.7■□□□□ 0.42
ITGB1-204ENST00000417122 MSH4O15457 936 aa17.7■□□□□ 0.42
ITGB1-204ENST00000417122 TLL1O43897 1013 aa17.7■□□□□ 0.42
ITGB1-204ENST00000417122 LARGE1O95461 756 aa17.7■□□□□ 0.42
ITGB1-204ENST00000417122 CHRNA1P02708 482 aa17.7■□□□□ 0.42
ITGB1-204ENST00000417122 PDXDC2PQ6P474 469 aa17.7■□□□□ 0.42
ITGB1-204ENST00000417122 TMCO2Q7Z6W1 182 aaPredicted RBP17.7■□□□□ 0.42
ITGB1-204ENST00000417122 TRAPPC12Q8WVT3 735 aa17.7■□□□□ 0.42
ITGB1-204ENST00000417122 GTF3C6Q969F1 213 aa17.7■□□□□ 0.42
ITGB1-204ENST00000417122 ZBTB10Q96DT7 871 aa17.7■□□□□ 0.42
ITGB1-204ENST00000417122 ZBED2Q9BTP6 218 aa17.7■□□□□ 0.42
ITGB1-204ENST00000417122 ORC3Q9UBD5 711 aaPredicted RBP17.7■□□□□ 0.42
ITGB1-204ENST00000417122 PCDHA10Q9Y5I2 948 aa17.7■□□□□ 0.42
ITGB1-204ENST00000417122 CYP3A7-CYP3A51PA0A087WV96 503 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 HBP1O60381 514 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 RPLP2P05387 115 aaKnown RBP17.69■□□□□ 0.42
ITGB1-204ENST00000417122 PSAPP07602 524 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 CYP3A7P24462 503 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 MGAT3Q09327 533 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 NONOQ15233 471 aaKnown RBP eCLIP17.69■□□□□ 0.421e-8■■■□□ 16.8
ITGB1-204ENST00000417122 C8orf34Q49A92 452 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 Q4G0T1 1027 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.69■□□□□ 0.42
ITGB1-204ENST00000417122 KRT25Q7Z3Z0 450 aa17.69■□□□□ 0.42
ITGB1-204ENST00000417122 ATP8B4Q8TF62 1192 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms