RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 TMEM199Q8N511 208 aa10.38□□□□□ -0.75
CHRNA1-206ENST00000416004 MBOAT7Q96N66 472 aa10.38□□□□□ -0.75
CHRNA1-206ENST00000416004 TNMDQ9H2S6 317 aa10.38□□□□□ -0.75
CHRNA1-206ENST00000416004 DDX25Q9UHL0 483 aaKnown RBP10.38□□□□□ -0.75
CHRNA1-206ENST00000416004 NOD1Q9Y239 953 aa10.38□□□□□ -0.75
CHRNA1-206ENST00000416004 LTBP2Q14767 1821 aa10.38□□□□□ -0.75
CHRNA1-206ENST00000416004 CYP3A7-CYP3A51PA0A087WV96 503 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 FAM86B1E9PN63 330 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 FAM86B2P0C5J1 330 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 CYP3A7P24462 503 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 PRPHP41219 470 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 FXR1P51114 621 aaKnown RBP eCLIP10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 USP11P51784 963 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 FPGSQ05932 587 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 ORC2Q13416 577 aaPredicted RBP10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 LAMC2Q13753 1193 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 CALCRLQ16602 461 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 LONRF3Q496Y0 759 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 FAM47CQ5HY64 1035 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 MCTP2Q6DN12 878 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 DTHD1Q6ZMT9 781 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 RBM43Q6ZSC3 357 aaKnown RBP10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 CYP2W1Q8TAV3 490 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 HAS1Q92839 578 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 ERCC4Q92889 916 aaPredicted RBP10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 BADQ92934 168 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 LENG9Q96B70 501 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 ZFP91Q96JP5 570 aaPredicted RBP10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 PDCD2LQ9BRP1 358 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 KATNAL1Q9BW62 490 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 GRPEL1Q9HAV7 217 aa10.37□□□□□ -0.75
CHRNA1-206ENST00000416004 LAD1O00515 517 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 KIAA0355O15063 1070 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 POLR2DO15514 142 aaKnown RBP10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 TGFB3P10600 412 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 GCFC2P16383 781 aaKnown RBP10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 CHMP4BP1P59074 171 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 PPIGQ13427 754 aaKnown RBP eCLIP10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 PGM5Q15124 567 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 DGKDQ16760 1214 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 XRRA1Q6P2D8 792 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 NLRX1Q86UT6 975 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 TEX2Q8IWB9 1127 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 PDILTQ8N807 584 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 IL31RAQ8NI17 732 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 FUCA2Q9BTY2 467 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 MTIF3Q9H2K0 278 aaKnown RBP10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 PRO3102Q9H379 93 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 FAM13BQ9NYF5 915 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 TIMP1P01033 207 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 CYP3A4P08684 503 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 CIITAP33076 1130 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 LONP1P36776 959 aaKnown RBP10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 TECP42680 631 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 TXKP42681 527 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 FAAP100Q0VG06 881 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 LRIT3Q3SXY7 679 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 PRR16Q569H4 304 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 LRSAM1Q6UWE0 723 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 CCDC155Q8N6L0 562 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 CDHR1Q96JP9 859 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 MLXIPQ9HAP2 919 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 KCNMB3Q9NPA1 279 aa10.36□□□□□ -0.75
CHRNA1-206ENST00000416004 IGLV3-22A0A075B6J6 115 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 A0A087WWV3 80 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 TRIM43BA6NCK2 446 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 A6NJR5 290 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 NOP56O00567 594 aaKnown RBP10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 ACTN4O43707 911 aaKnown RBP10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 LETM1O95202 739 aaPredicted RBP10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 CDK7P50613 346 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 PURAQ00577 322 aaKnown RBP10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 PTPN11Q06124 597 aaPredicted RBP10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 LY6KQ17RY6 165 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 MOXD1Q6UVY6 613 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 KRBA2Q6ZNG9 492 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 VSIG10LQ86VR7 867 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 FAM126BQ8IXS8 530 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 GIMAP8Q8ND71 665 aaPredicted RBP10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 ETNPPLQ8TBG4 499 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 LRRC15Q8TF66 581 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 TRIM43Q96BQ3 446 aaPredicted RBP10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 SDF4Q9BRK5 362 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 SERTAD1Q9UHV2 236 aa10.35□□□□□ -0.75
CHRNA1-206ENST00000416004 CTAGE5O15320 804 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 OFD1O75665 1012 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 FXR2P51116 673 aaKnown RBP eCLIP10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 NEDD9Q14511 834 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 E2F4Q16254 413 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 Q4G0T1 1027 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 UTP14CQ5TAP6 766 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 MFSD5Q6N075 450 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 GPR153Q6NV75 609 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 NFRKBQ6P4R8 1299 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 SH3RF1Q7Z6J0 888 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 GRAMD1CQ8IYS0 662 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 IGSF22Q8N9C0 903 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 RETREG2Q8NC44 543 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 DHX58Q96C10 678 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms