RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 FAM208BQ5VWN6 2430 aa4.1□□□□□ -1.75
APP-207ENST00000415997 DDX60LQ5H9U9 1706 aaKnown RBP4.09□□□□□ -1.75
APP-207ENST00000415997 GCN1Q92616 2671 aaKnown RBP4.09□□□□□ -1.75
APP-207ENST00000415997 LTBP2Q14767 1821 aa4.09□□□□□ -1.75
APP-207ENST00000415997 PSME4Q14997 1843 aa4.09□□□□□ -1.75
APP-207ENST00000415997 ZFYVE26Q68DK2 2539 aa4.09□□□□□ -1.75
APP-207ENST00000415997 TREHO43280 583 aa4.09□□□□□ -1.75
APP-207ENST00000415997 HPXP02790 462 aa4.09□□□□□ -1.75
APP-207ENST00000415997 USP17L7P0C7H9 530 aa4.09□□□□□ -1.75
APP-207ENST00000415997 MED14OSP0DP75 135 aa4.09□□□□□ -1.75
APP-207ENST00000415997 KIR3DL1P43629 444 aa4.09□□□□□ -1.75
APP-207ENST00000415997 PSMC4P43686 418 aa4.09□□□□□ -1.75
APP-207ENST00000415997 DLG4P78352 724 aa4.09□□□□□ -1.75
APP-207ENST00000415997 PRKCZQ05513 592 aa4.09□□□□□ -1.75
APP-207ENST00000415997 EGR3Q06889 387 aa4.09□□□□□ -1.75
APP-207ENST00000415997 PRKG1Q13976 671 aa4.09□□□□□ -1.75
APP-207ENST00000415997 SEPT6Q14141 434 aa4.09□□□□□ -1.75
APP-207ENST00000415997 TTBK2Q6IQ55 1244 aa4.09□□□□□ -1.75
APP-207ENST00000415997 ZNF790Q6PG37 636 aa4.09□□□□□ -1.75
APP-207ENST00000415997 TMPRSS7Q7RTY8 843 aa4.09□□□□□ -1.75
APP-207ENST00000415997 ZBED3Q96IU2 234 aaPredicted RBP4.09□□□□□ -1.75
APP-207ENST00000415997 TESK2Q96S53 571 aa4.09□□□□□ -1.75
APP-207ENST00000415997 SGPP1Q9BX95 441 aa4.09□□□□□ -1.75
APP-207ENST00000415997 SRCIN1Q9C0H9 1055 aa4.09□□□□□ -1.75
APP-207ENST00000415997 C11orf49Q9H6J7 331 aa4.09□□□□□ -1.75
APP-207ENST00000415997 PARD6AQ9NPB6 346 aa4.09□□□□□ -1.75
APP-207ENST00000415997 CNOT6Q9ULM6 557 aaKnown RBP4.09□□□□□ -1.75
APP-207ENST00000415997 SNCAIPQ9Y6H5 919 aa4.09□□□□□ -1.75
APP-207ENST00000415997 MYPNQ86TC9 1320 aa4.09□□□□□ -1.75
APP-207ENST00000415997 PPM1GO15355 546 aaPredicted RBP4.08□□□□□ -1.76
APP-207ENST00000415997 SIPA1L3O60292 1781 aaPredicted RBP4.08□□□□□ -1.76
APP-207ENST00000415997 PGRP06401 933 aa4.08□□□□□ -1.76
APP-207ENST00000415997 HOXD10P28358 340 aa4.08□□□□□ -1.76
APP-207ENST00000415997 MAP1BP46821 2468 aaKnown RBP4.08□□□□□ -1.76
APP-207ENST00000415997 PIP4K2AP48426 406 aaPredicted RBP4.08□□□□□ -1.76
APP-207ENST00000415997 GALK1P51570 392 aa4.08□□□□□ -1.76
APP-207ENST00000415997 KCNQ1P51787 676 aa4.08□□□□□ -1.76
APP-207ENST00000415997 BPTFQ12830 3046 aa4.08□□□□□ -1.76
APP-207ENST00000415997 COL9A2Q14055 689 aaPredicted RBP4.08□□□□□ -1.76
APP-207ENST00000415997 LRRC26Q2I0M4 334 aa4.08□□□□□ -1.76
APP-207ENST00000415997 SUSD4Q5VX71 490 aa4.08□□□□□ -1.76
APP-207ENST00000415997 TMC4Q7Z404 712 aa4.08□□□□□ -1.76
APP-207ENST00000415997 SIRT2Q8IXJ6 389 aa4.08□□□□□ -1.76
APP-207ENST00000415997 ASPMQ8IZT6 3477 aa4.08□□□□□ -1.76
APP-207ENST00000415997 RETREG2Q8NC44 543 aa4.08□□□□□ -1.76
APP-207ENST00000415997 OPTNQ96CV9 577 aa4.08□□□□□ -1.76
APP-207ENST00000415997 TMX4Q9H1E5 349 aaPredicted RBP4.08□□□□□ -1.76
APP-207ENST00000415997 OTOFQ9HC10 1997 aa4.08□□□□□ -1.76
APP-207ENST00000415997 TJP2Q9UDY2 1190 aa4.08□□□□□ -1.76
APP-207ENST00000415997 DUSP13Q9UII6 198 aa4.08□□□□□ -1.76
APP-207ENST00000415997 OGDHLQ9ULD0 1010 aa4.08□□□□□ -1.76
APP-207ENST00000415997 GABRQQ9UN88 632 aa4.08□□□□□ -1.76
APP-207ENST00000415997 PCDHB5Q9Y5E4 795 aa4.08□□□□□ -1.76
APP-207ENST00000415997 USP16Q9Y5T5 823 aa4.08□□□□□ -1.76
APP-207ENST00000415997 VPS13AQ96RL7 3174 aa4.08□□□□□ -1.76
APP-207ENST00000415997 ANKRD36CQ5JPF3 1778 aa4.07□□□□□ -1.76
APP-207ENST00000415997 MAST2Q6P0Q8 1798 aa4.07□□□□□ -1.76
APP-207ENST00000415997 CCL15-CCL14A0A0B4J2E2 113 aa4.07□□□□□ -1.76
APP-207ENST00000415997 ERVV-1B6SEH8 477 aa4.07□□□□□ -1.76
APP-207ENST00000415997 BTBD19C9JJ37 291 aa4.07□□□□□ -1.76
APP-207ENST00000415997 ADCY3O60266 1144 aa4.07□□□□□ -1.76
APP-207ENST00000415997 USP2O75604 605 aaPredicted RBP4.07□□□□□ -1.76
APP-207ENST00000415997 CAP2P40123 477 aa4.07□□□□□ -1.76
APP-207ENST00000415997 ETV3P41162 512 aa4.07□□□□□ -1.76
APP-207ENST00000415997 GTF2A2P52657 109 aa4.07□□□□□ -1.76
APP-207ENST00000415997 ATP2B2Q01814 1243 aa4.07□□□□□ -1.76
APP-207ENST00000415997 TFF2Q03403 129 aa4.07□□□□□ -1.76
APP-207ENST00000415997 GRAPQ13588 217 aa4.07□□□□□ -1.76
APP-207ENST00000415997 CCL15Q16663 113 aa4.07□□□□□ -1.76
APP-207ENST00000415997 TIGD5Q53EQ6 642 aa4.07□□□□□ -1.76
APP-207ENST00000415997 SCARA3Q6AZY7 606 aa4.07□□□□□ -1.76
APP-207ENST00000415997 ALG1LQ6GMV1 187 aa4.07□□□□□ -1.76
APP-207ENST00000415997 APOBEC3FQ8IUX4 373 aaKnown RBP4.07□□□□□ -1.76
APP-207ENST00000415997 ANKRD13AQ8IZ07 590 aa4.07□□□□□ -1.76
APP-207ENST00000415997 ZNF34Q8IZ26 560 aa4.07□□□□□ -1.76
APP-207ENST00000415997 TTC5Q8N0Z6 440 aa4.07□□□□□ -1.76
APP-207ENST00000415997 OXR1Q8N573 874 aa4.07□□□□□ -1.76
APP-207ENST00000415997 GRAPLQ8TC17 118 aaPredicted RBP4.07□□□□□ -1.76
APP-207ENST00000415997 PIWIL2Q8TC59 973 aaKnown RBP4.07□□□□□ -1.76
APP-207ENST00000415997 GAL3ST3Q96A11 431 aa4.07□□□□□ -1.76
APP-207ENST00000415997 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.07□□□□□ -1.76
APP-207ENST00000415997 DEFB129Q9H1M3 183 aa4.07□□□□□ -1.76
APP-207ENST00000415997 DUSP15Q9H1R2 295 aaPredicted RBP4.07□□□□□ -1.76
APP-207ENST00000415997 SLC6A17Q9H1V8 727 aa4.07□□□□□ -1.76
APP-207ENST00000415997 TRIT1Q9H3H1 467 aaKnown RBP4.07□□□□□ -1.76
APP-207ENST00000415997 GPATCH2Q9NW75 528 aa4.07□□□□□ -1.76
APP-207ENST00000415997 GPR160Q9UJ42 338 aa4.07□□□□□ -1.76
APP-207ENST00000415997 NAV2Q8IVL1 2488 aa4.07□□□□□ -1.76
APP-207ENST00000415997 FAM186AA6NE01 2351 aa4.07□□□□□ -1.76
APP-207ENST00000415997 TCF20Q9UGU0 1960 aaKnown RBP4.07□□□□□ -1.76
APP-207ENST00000415997 MYOCOSA0A1B0GUC4 107 aa4.06□□□□□ -1.76
APP-207ENST00000415997 GIPC1O14908 333 aa4.06□□□□□ -1.76
APP-207ENST00000415997 ERC2O15083 957 aa4.06□□□□□ -1.76
APP-207ENST00000415997 FOXD2O60548 495 aaPredicted RBP4.06□□□□□ -1.76
APP-207ENST00000415997 TNNT2P45379 298 aaPredicted RBP4.06□□□□□ -1.76
APP-207ENST00000415997 MMP14P50281 582 aa4.06□□□□□ -1.76
APP-207ENST00000415997 GPSM2P81274 684 aa4.06□□□□□ -1.76
APP-207ENST00000415997 CCDC85BQ15834 202 aaPredicted RBP4.06□□□□□ -1.76
APP-207ENST00000415997 SV2BQ7L1I2 683 aa4.06□□□□□ -1.76
APP-207ENST00000415997 NPM2Q86SE8 214 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms