RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 TCEAL9Q9UHQ7 104 aa10.84□□□□□ -0.67
RIF1-202ENST00000414861 SLC26A4O43511 780 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 XRCC5P13010 732 aaKnown RBP10.83□□□□□ -0.68
RIF1-202ENST00000414861 SFNP31947 248 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 DPYDQ12882 1025 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 CUL4BQ13620 913 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 KIF22Q14807 665 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 CCDC144BQ3MJ40 725 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 HSDL1Q3SXM5 330 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 KCNV1Q6PIU1 500 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 ABHD15Q6UXT9 468 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 SMAP1Q8IYB5 467 aaPredicted RBP10.83□□□□□ -0.68
RIF1-202ENST00000414861 ELOA2Q8IYF1 753 aaPredicted RBP10.83□□□□□ -0.68
RIF1-202ENST00000414861 CUEDC2Q9H467 287 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 PCDHA5Q9Y5H7 936 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 PCDHA10Q9Y5I2 948 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 GSTTP1A0A1W2PQM5 241 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 TMEM150BA6NC51 233 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 P4HBP07237 508 aaKnown RBP10.83□□□□□ -0.68
RIF1-202ENST00000414861 SUPT20HL2P0C7V6 817 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 ZNF865P0CJ78 1059 aaPredicted RBP10.83□□□□□ -0.68
RIF1-202ENST00000414861 SMPD1P17405 629 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 ARHGAP1Q07960 439 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 TRIM32Q13049 653 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 RDM1Q8NG50 284 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 NEK9Q8TD19 979 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 STK24Q9Y6E0 443 aa10.83□□□□□ -0.68
RIF1-202ENST00000414861 BIN1O00499 593 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 ZNF862O60290 1169 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 QARSP47897 775 aaKnown RBP10.82□□□□□ -0.68
RIF1-202ENST00000414861 KANK3Q6NY19 840 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 GAS2L3Q86XJ1 694 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 DNAJC5GQ8N7S2 189 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 GIMAP8Q8ND71 665 aaPredicted RBP10.82□□□□□ -0.68
RIF1-202ENST00000414861 TRPV1Q8NER1 839 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 PCYT2Q99447 389 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 MLXIPQ9HAP2 919 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 MAGEF1Q9HAY2 307 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 GABBR1Q9UBS5 961 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 SRRDQ9UH36 339 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 TUBE1Q9UJT0 475 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 IGSF9BQ9UPX0 1349 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 MYMKA6NI61 221 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 GTPBP6O43824 516 aaPredicted RBP10.82□□□□□ -0.68
RIF1-202ENST00000414861 FKTNO75072 461 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 ATG7O95352 703 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 SSBP05455 408 aaKnown RBP eCLIP10.82□□□□□ -0.68
RIF1-202ENST00000414861 PLA2G4BP0C869 781 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 ELNP15502 786 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 SLC12A3P55017 1021 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 MAP2K1Q02750 393 aaPredicted RBP10.82□□□□□ -0.68
RIF1-202ENST00000414861 TYRO3Q06418 890 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 SWSAP1Q6NVH7 229 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 TRMT1LQ7Z2T5 733 aaKnown RBP10.82□□□□□ -0.68
RIF1-202ENST00000414861 TRIM50Q86XT4 487 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 DHX37Q8IY37 1157 aaKnown RBP10.82□□□□□ -0.68
RIF1-202ENST00000414861 SPATA20Q8TB22 786 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 SPATA33Q96N06 139 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 GPR20Q99678 358 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 TRIM9Q9C026 710 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 BHMT2Q9H2M3 363 aa10.82□□□□□ -0.68
RIF1-202ENST00000414861 MYH11P35749 1972 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 LETM1O95202 739 aaPredicted RBP10.81□□□□□ -0.68
RIF1-202ENST00000414861 PSAPP07602 524 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 PSMC5P62195 406 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 DUSP28Q4G0W2 176 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 ISM2Q6H9L7 571 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 LRSAM1Q6UWE0 723 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 SV2BQ7L1I2 683 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 SH2D3AQ9BRG2 576 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 ZSWIM4Q9H7M6 989 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 HOOK1Q9UJC3 728 aaKnown RBP10.81□□□□□ -0.68
RIF1-202ENST00000414861 DNM3Q9UQ16 869 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 IGKV6D-21A0A0A0MT36 114 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 NPHP3-ACAD11A0A0J9YXS1 232 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 BACH1O14867 736 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 EYA4O95677 639 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 BMP6P22004 513 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 MUTP22033 750 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 TCF7P36402 384 aaPredicted RBP10.81□□□□□ -0.68
RIF1-202ENST00000414861 SARSP49591 514 aaKnown RBP10.81□□□□□ -0.68
RIF1-202ENST00000414861 UTP14CQ5TAP6 766 aaKnown RBP10.81□□□□□ -0.68
RIF1-202ENST00000414861 NT5DC1Q5TFE4 455 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 PLA2G4FQ68DD2 849 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 MIS18BP1Q6P0N0 1132 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 ERO1AQ96HE7 468 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 RUSC1Q9BVN2 902 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 WBP1LQ9NX94 342 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 MAN1B1Q9UKM7 699 aa10.81□□□□□ -0.68
RIF1-202ENST00000414861 NOP56O00567 594 aaKnown RBP10.8□□□□□ -0.68
RIF1-202ENST00000414861 KLRC4O43908 158 aa10.8□□□□□ -0.68
RIF1-202ENST00000414861 STBD1O95210 358 aa10.8□□□□□ -0.68
RIF1-202ENST00000414861 LYPLA2O95372 231 aa10.8□□□□□ -0.68
RIF1-202ENST00000414861 GH1P01241 217 aa10.8□□□□□ -0.68
RIF1-202ENST00000414861 CYBAP13498 195 aa10.8□□□□□ -0.68
RIF1-202ENST00000414861 CYP11B2P19099 503 aa10.8□□□□□ -0.68
RIF1-202ENST00000414861 ATP4AP20648 1035 aa10.8□□□□□ -0.68
RIF1-202ENST00000414861 IRX5P78411 483 aaPredicted RBP10.8□□□□□ -0.68
RIF1-202ENST00000414861 PRKCEQ02156 737 aa10.8□□□□□ -0.68
RIF1-202ENST00000414861 CACNB1Q02641 598 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms