RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 RCAN1P53805 252 aa17.74■□□□□ 0.43
ACTB-202ENST00000414620 ITGB3BPQ13352 177 aaPredicted RBP17.74■□□□□ 0.43
ACTB-202ENST00000414620 AP3B2Q13367 1082 aa17.74■□□□□ 0.43
ACTB-202ENST00000414620 PFKFB3Q16875 520 aaPredicted RBP17.74■□□□□ 0.43
ACTB-202ENST00000414620 FAM26DQ5JW98 314 aa17.74■□□□□ 0.43
ACTB-202ENST00000414620 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
ACTB-202ENST00000414620 DNAJB3Q8WWF6 145 aa17.74■□□□□ 0.43
ACTB-202ENST00000414620 TGS1Q96RS0 853 aaKnown RBP17.74■□□□□ 0.43
ACTB-202ENST00000414620 IFIH1Q9BYX4 1025 aaKnown RBP17.74■□□□□ 0.43
ACTB-202ENST00000414620 AGO4Q9HCK5 861 aaKnown RBP17.74■□□□□ 0.43
ACTB-202ENST00000414620 CUL9Q8IWT3 2517 aa17.74■□□□□ 0.43
ACTB-202ENST00000414620 REV3LO60673 3130 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.73■□□□□ 0.43
ACTB-202ENST00000414620 POU3F3P20264 500 aaPredicted RBP17.73■□□□□ 0.43
ACTB-202ENST00000414620 RPS6KB1P23443 525 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 SREBF1P36956 1147 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 ACTR2P61160 394 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 ERVK-21P61565 698 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 MGAT3Q09327 533 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 CEP55Q53EZ4 464 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 TAF2Q6P1X5 1199 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 ADAMTS19Q8TE59 1207 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 TRAPPC12Q8WVT3 735 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 PHKBQ93100 1093 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 C17orf80Q9BSJ5 609 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 FAM49AQ9H0Q0 323 aaPredicted RBP17.73■□□□□ 0.43
ACTB-202ENST00000414620 AZI2Q9H6S1 392 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 SUGCTQ9HAC7 445 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 TRPC6Q9Y210 931 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 INSL6Q9Y581 213 aa17.73■□□□□ 0.43
ACTB-202ENST00000414620 NFASCO94856 1347 aa17.72■□□□□ 0.43
ACTB-202ENST00000414620 VCANP13611 3396 aa17.72■□□□□ 0.43
ACTB-202ENST00000414620 NID2Q14112 1375 aa17.72■□□□□ 0.43
ACTB-202ENST00000414620 INSRRP14616 1297 aa17.72■□□□□ 0.43
ACTB-202ENST00000414620 MARCH8Q5T0T0 291 aa17.72■□□□□ 0.43
ACTB-202ENST00000414620 APBB2Q92870 758 aa17.72■□□□□ 0.43
ACTB-202ENST00000414620 YME1L1Q96TA2 773 aa17.72■□□□□ 0.43
ACTB-202ENST00000414620 CDY2AQ9Y6F7 541 aa17.72■□□□□ 0.43
ACTB-202ENST00000414620 CCDC196A0A1B0GTZ2 297 aa17.71■□□□□ 0.43
ACTB-202ENST00000414620 MBLAC1A4D2B0 266 aaPredicted RBP17.71■□□□□ 0.43
ACTB-202ENST00000414620 REC8O95072 547 aa17.71■□□□□ 0.43
ACTB-202ENST00000414620 KCNQ1P51787 676 aa17.71■□□□□ 0.43
ACTB-202ENST00000414620 CCT2P78371 535 aaKnown RBP17.71■□□□□ 0.43
ACTB-202ENST00000414620 HTRA4P83105 476 aaPredicted RBP17.71■□□□□ 0.43
ACTB-202ENST00000414620 TMEM62Q0P6H9 643 aa17.71■□□□□ 0.43
ACTB-202ENST00000414620 PLCB4Q15147 1175 aa17.71■□□□□ 0.43
ACTB-202ENST00000414620 PKN1Q16512 942 aa17.71■□□□□ 0.43
ACTB-202ENST00000414620 RSPH3Q86UC2 560 aa17.71■□□□□ 0.43
ACTB-202ENST00000414620 PLA2G4DQ86XP0 818 aa17.71■□□□□ 0.43
ACTB-202ENST00000414620 RASGRP4Q8TDF6 673 aa17.71■□□□□ 0.43
ACTB-202ENST00000414620 TOP1MTQ969P6 601 aa17.71■□□□□ 0.43
ACTB-202ENST00000414620 NECAB3Q96P71 396 aaPredicted RBP17.71■□□□□ 0.43
ACTB-202ENST00000414620 GLT8D2Q9H1C3 349 aa17.71■□□□□ 0.43
ACTB-202ENST00000414620 FAM86B1E9PN63 330 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 TNFRSF10AO00220 468 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 MEIS1O00470 390 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 CCNE2O96020 404 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 FAM86B2P0C5J1 330 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 STAT5BP51692 787 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 AKAP17AQ02040 695 aaKnown RBP17.7■□□□□ 0.42
ACTB-202ENST00000414620 LPIN1Q14693 890 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 FBXO22Q8NEZ5 403 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 SP7Q8TDD2 431 aaPredicted RBP17.7■□□□□ 0.42
ACTB-202ENST00000414620 UHRF1Q96T88 793 aaPredicted RBP17.7■□□□□ 0.42
ACTB-202ENST00000414620 SLC26A6Q9BXS9 759 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 NCOA5Q9HCD5 579 aaKnown RBP17.7■□□□□ 0.42
ACTB-202ENST00000414620 C6orf50Q9HD87 102 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 TTC3P53804 2025 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 COL4A6Q14031 1691 aa17.7■□□□□ 0.42
ACTB-202ENST00000414620 RRN3P2A6NIE6 340 aa17.69■□□□□ 0.42
ACTB-202ENST00000414620 PRPF3O43395 683 aaKnown RBP17.69■□□□□ 0.42
ACTB-202ENST00000414620 PSMA5P28066 241 aa17.69■□□□□ 0.42
ACTB-202ENST00000414620 MRPS6P82932 125 aaKnown RBP17.69■□□□□ 0.42
ACTB-202ENST00000414620 RPAINQ86UA6 219 aa17.69■□□□□ 0.42
ACTB-202ENST00000414620 REXO1Q8N1G1 1221 aaKnown RBP17.69■□□□□ 0.42
ACTB-202ENST00000414620 AGXT2Q9BYV1 514 aa17.69■□□□□ 0.42
ACTB-202ENST00000414620 ZMYND12Q9H0C1 365 aa17.69■□□□□ 0.42
ACTB-202ENST00000414620 IGLV3-22A0A075B6J6 115 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 ESYT2A0FGR8 921 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 POTEB3A0JP26 581 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 BACH1O14867 736 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 TRANK1O15050 2925 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 NTRK3Q16288 839 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 FBXO47Q5MNV8 452 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 POTEBQ6S5H4 581 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 NIPA1Q7RTP0 329 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 PLPPR4Q7Z2D5 763 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 CCDC60Q8IWA6 550 aaPredicted RBP17.68■□□□□ 0.42
ACTB-202ENST00000414620 TEX2Q8IWB9 1127 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 CCDC12Q8WUD4 166 aaPredicted RBP17.68■□□□□ 0.42
ACTB-202ENST00000414620 LARP6Q9BRS8 491 aaKnown RBP17.68■□□□□ 0.42
ACTB-202ENST00000414620 VPS54Q9P1Q0 977 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 TRPV2Q9Y5S1 764 aa17.68■□□□□ 0.42
ACTB-202ENST00000414620 SPTBN5Q9NRC6 3674 aaKnown RBP17.67■□□□□ 0.42
ACTB-202ENST00000414620 M0QZ92 97 aa17.67■□□□□ 0.42
ACTB-202ENST00000414620 ATG7O95352 703 aa17.67■□□□□ 0.42
ACTB-202ENST00000414620 CD52P31358 61 aa17.67■□□□□ 0.42
ACTB-202ENST00000414620 AAK1Q2M2I8 961 aa17.67■□□□□ 0.42
ACTB-202ENST00000414620 EPC2Q52LR7 807 aa17.67■□□□□ 0.42
ACTB-202ENST00000414620 TSHZ1Q6ZSZ6 1077 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms