RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 CCDC155Q8N6L0 562 aa11.41□□□□□ -0.58
TMEM248-202ENST00000413593 RETREG2Q8NC44 543 aa11.41□□□□□ -0.58
TMEM248-202ENST00000413593 AFAP1L1Q8TED9 768 aa11.41□□□□□ -0.58
TMEM248-202ENST00000413593 LMBR1Q8WVP7 490 aa11.41□□□□□ -0.58
TMEM248-202ENST00000413593 ATP6V0A1Q93050 837 aa11.41□□□□□ -0.58
TMEM248-202ENST00000413593 WNT8BQ93098 351 aa11.41□□□□□ -0.58
TMEM248-202ENST00000413593 VWCEQ96DN2 955 aa11.41□□□□□ -0.58
TMEM248-202ENST00000413593 TMX3Q96JJ7 454 aa11.41□□□□□ -0.58
TMEM248-202ENST00000413593 RIT2Q99578 217 aa11.41□□□□□ -0.58
TMEM248-202ENST00000413593 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.41□□□□□ -0.587e-7■■□□□ 13.4
TMEM248-202ENST00000413593 NRCAMQ92823 1304 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 BACH1O14867 736 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 TREHO43280 583 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 SLC37A4O43826 429 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 GAS7O60861 476 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 IQCF3P0C7M6 154 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 GNAT1P11488 350 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 SELPP16109 830 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 GCFC2P16383 781 aaKnown RBP11.4□□□□□ -0.58
TMEM248-202ENST00000413593 PPFIA1Q13136 1202 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 PLCB4Q15147 1175 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 GRIK4Q16099 956 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 LRCH2Q5VUJ6 765 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 PPP4R3AQ6IN85 833 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 MIS18BP1Q6P0N0 1132 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 PSRC1Q6PGN9 363 aaPredicted RBP11.4□□□□□ -0.58
TMEM248-202ENST00000413593 ZNF365Q70YC5 407 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 CCDC60Q8IWA6 550 aaPredicted RBP11.4□□□□□ -0.58
TMEM248-202ENST00000413593 SMAP1Q8IYB5 467 aaPredicted RBP11.4□□□□□ -0.58
TMEM248-202ENST00000413593 ETNPPLQ8TBG4 499 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 GJA10Q969M2 543 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 C8orf76Q96K31 380 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 RNPC3Q96LT9 517 aaKnown RBP11.4□□□□□ -0.58
TMEM248-202ENST00000413593 DDX25Q9UHL0 483 aaKnown RBP11.4□□□□□ -0.58
TMEM248-202ENST00000413593 TCEAL9Q9UHQ7 104 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 PCDHA10Q9Y5I2 948 aa11.4□□□□□ -0.58
TMEM248-202ENST00000413593 MBLAC1A4D2B0 266 aaPredicted RBP11.39□□□□□ -0.59
TMEM248-202ENST00000413593 PSMD10O75832 226 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 PSAPP07602 524 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 PFKMP08237 780 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 CKBP12277 381 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 INSRRP14616 1297 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 RFC2P35250 354 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 SLC26A2P50443 739 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 GUCY1B3Q02153 619 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 SAFBQ15424 915 aaKnown RBP eCLIP11.39□□□□□ -0.59
TMEM248-202ENST00000413593 MARCH8Q5T0T0 291 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 RASIP1Q5U651 963 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 FAM160B1Q5W0V3 765 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 SWSAP1Q6NVH7 229 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 TRAF7Q6Q0C0 670 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 LRRC8DQ7L1W4 858 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 RPUSD2Q8IZ73 545 aaKnown RBP11.39□□□□□ -0.59
TMEM248-202ENST00000413593 FAM184AQ8NB25 1140 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 FBXO18Q8NFZ0 1043 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 LRCH3Q96II8 777 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 NAP1L4Q99733 375 aaKnown RBP11.39□□□□□ -0.59
TMEM248-202ENST00000413593 TEKT3Q9BXF9 490 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 KCNMB3Q9NPA1 279 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 ZNF302Q9NR11 478 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 DISC1Q9NRI5 854 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 TRPC6Q9Y210 931 aa11.39□□□□□ -0.59
TMEM248-202ENST00000413593 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 WDR64B1ANS9 1081 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 CHMP2AO43633 222 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 CCNT1O60563 726 aaKnown RBP11.38□□□□□ -0.59
TMEM248-202ENST00000413593 FGBP02675 491 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 SFNP31947 248 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 THPOP40225 353 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 JAK3P52333 1124 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 GPNMBQ14956 572 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 ZNF618Q5T7W0 954 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 PDXDC2PQ6P474 469 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 B3GNT9Q6UX72 402 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 DEFB128Q7Z7B8 93 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 ATP8B4Q8TF62 1192 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 HERVK_113Q902F9 699 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 TNPO1Q92973 898 aaKnown RBP11.38□□□□□ -0.59
TMEM248-202ENST00000413593 FAM20AQ96MK3 541 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 UNC45AQ9H3U1 944 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 TUBE1Q9UJT0 475 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 SAMM50Q9Y512 469 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 MAFBQ9Y5Q3 323 aaPredicted RBP11.38□□□□□ -0.59
TMEM248-202ENST00000413593 DOCK5Q9H7D0 1870 aa11.38□□□□□ -0.59
TMEM248-202ENST00000413593 IGSF9BQ9UPX0 1349 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 MYH7BA7E2Y1 1941 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 RRN3P2A6NIE6 340 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 WNT7AO00755 349 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 TBX3O15119 743 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 HBP1O60381 514 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 NBNO60934 754 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 CAND2O75155 1236 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 PARNO95453 639 aaKnown RBP11.37□□□□□ -0.59
TMEM248-202ENST00000413593 CXCL10P02778 98 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 ATP4AP20648 1035 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 IGBP1P78318 339 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 MBTPS1Q14703 1052 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 TAF2Q6P1X5 1199 aa11.37□□□□□ -0.59
TMEM248-202ENST00000413593 RUFY4Q6ZNE9 571 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms