RNA–Protein interactions for RNA: ENST00000412413.1

AC004009.1-201, humanhuman

TSL 5 BASIC

Gene AC004009.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.1-201ENST00000412413 GNAT1P11488 350 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 GSPT1P15170 499 aaKnown RBP9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 IBSPP21815 317 aaPredicted RBP9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 PLA2G5P39877 138 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 GPM6BQ13491 265 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 NEDD9Q14511 834 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 PTPROQ16827 1216 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 EPC2Q52LR7 807 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 TTC22Q5TAA0 569 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 USP17L6PQ6QN14 398 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 NFXL1Q6ZNB6 911 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 RAB11FIP4Q86YS3 637 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 SPNS2Q8IVW8 549 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 NCOA7Q8NI08 942 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 UIMC1Q96RL1 719 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 GPR20Q99678 358 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 IFIH1Q9BYX4 1025 aaKnown RBP9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 RIOX1Q9H6W3 641 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 LMCD1Q9NZU5 365 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 ZNF215Q9UL58 517 aaPredicted RBP9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 HCN4Q9Y3Q4 1203 aa9.46□□□□□ -0.9
AC004009.1-201ENST00000412413 NCOR1O75376 2440 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 SPATA31C2B4DYI2 1134 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 FIBPO43427 364 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 NEFLP07196 543 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 IL9P15248 144 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 RXRAP19793 462 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 CHMLP26374 656 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 MARK3P27448 753 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 IGBP1P78318 339 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 IRX6P78412 446 aaPredicted RBP9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 MRPS9P82933 396 aaKnown RBP9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 GHRHRQ02643 423 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 SEMA3FQ13275 785 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 PLEKHG4Q58EX7 1191 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 PTCRAQ6ISU1 281 aaPredicted RBP9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 METTL7BQ6UX53 244 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 NLRX1Q86UT6 975 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 CMTR1Q8N1G2 835 aaKnown RBP9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 SAMD3Q8N6K7 520 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 CTCFLQ8NI51 663 aaPredicted RBP9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 RRP36Q96EU6 259 aaKnown RBP9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 ZFRQ96KR1 1074 aaKnown RBP9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 USP26Q9BXU7 913 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 CD320Q9NPF0 282 aa9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 SEC63Q9UGP8 760 aaKnown RBP9.45□□□□□ -0.9
AC004009.1-201ENST00000412413 hCG_1642624A0A1W2PR95 340 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 RCCD1A6NED2 376 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 GHRP10912 638 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 CTNNB1P35222 781 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 ANTXR2P58335 489 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 TROAPQ12815 778 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 TCEAL5Q5H9L2 206 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 CASC1Q6TDU7 716 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 RUFY4Q6ZNE9 571 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 TMEM192Q8IY95 271 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 GJD3Q8N144 294 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 BANK1Q8NDB2 785 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 LMBR1Q8WVP7 490 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 GLG1Q92896 1179 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 MRPL38Q96DV4 380 aaKnown RBP9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 INPP4AQ96PE3 977 aaPredicted RBP9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 GBF1Q92538 1859 aa9.44□□□□□ -0.9
AC004009.1-201ENST00000412413 TET1Q8NFU7 2136 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 TCF20Q9UGU0 1960 aaKnown RBP9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 CCDC69A6NI79 296 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 PRC1O43663 620 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 PLEKHA8P1O95397 391 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 ICAM3P32942 547 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 KIF5BP33176 963 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 TCF7P36402 384 aaPredicted RBP9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 HTRA4P83105 476 aaPredicted RBP9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 PPFIA1Q13136 1202 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 CLUL1Q15846 466 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 UBE2SQ16763 222 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 LEXMQ3ZCV2 418 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 TIGD5Q53EQ6 642 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 ZNF654Q8IZM8 581 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 FIBCD1Q8N539 461 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 WNT2BQ93097 391 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 TOP1MTQ969P6 601 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 ZBTB10Q96DT7 871 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 IL17RAQ96F46 866 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 SAMD11Q96NU1 681 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 FAM49AQ9H0Q0 323 aaPredicted RBP9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 CLDND1Q9NY35 253 aa9.43□□□□□ -0.9
AC004009.1-201ENST00000412413 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.42□□□□□ -0.9
AC004009.1-201ENST00000412413 H3BNC9 293 aa9.42□□□□□ -0.9
AC004009.1-201ENST00000412413 ATP9AO75110 1047 aa9.42□□□□□ -0.9
AC004009.1-201ENST00000412413 CAND2O75155 1236 aa9.42□□□□□ -0.9
AC004009.1-201ENST00000412413 STAM2O75886 525 aa9.42□□□□□ -0.9
AC004009.1-201ENST00000412413 CHRNA1P02708 482 aa9.42□□□□□ -0.9
AC004009.1-201ENST00000412413 CSPP1Q1MSJ5 1256 aa9.42□□□□□ -0.9
AC004009.1-201ENST00000412413 PCNX4Q63HM2 1172 aa9.42□□□□□ -0.9
AC004009.1-201ENST00000412413 RSPH3Q86UC2 560 aa9.42□□□□□ -0.9
AC004009.1-201ENST00000412413 FAM178BQ8IXR5 827 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms