RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 PPP4R3AQ6IN85 833 aa18.47■□□□□ 0.55
NOD1-202ENST00000411552 MIS18BP1Q6P0N0 1132 aa18.47■□□□□ 0.55
NOD1-202ENST00000411552 PLPPR4Q7Z2D5 763 aa18.47■□□□□ 0.55
NOD1-202ENST00000411552 SERINC5Q86VE9 423 aa18.47■□□□□ 0.55
NOD1-202ENST00000411552 CCDC60Q8IWA6 550 aaPredicted RBP18.47■□□□□ 0.55
NOD1-202ENST00000411552 SMAP1Q8IYB5 467 aaPredicted RBP18.47■□□□□ 0.55
NOD1-202ENST00000411552 CCDC155Q8N6L0 562 aa18.47■□□□□ 0.55
NOD1-202ENST00000411552 RETREG2Q8NC44 543 aa18.47■□□□□ 0.55
NOD1-202ENST00000411552 FBXO18Q8NFZ0 1043 aa18.47■□□□□ 0.55
NOD1-202ENST00000411552 CAGE1Q8TC20 777 aa18.47■□□□□ 0.55
NOD1-202ENST00000411552 LMBR1Q8WVP7 490 aa18.47■□□□□ 0.55
NOD1-202ENST00000411552 WNT8BQ93098 351 aa18.47■□□□□ 0.55
NOD1-202ENST00000411552 TCEAL9Q9UHQ7 104 aa18.47■□□□□ 0.55
NOD1-202ENST00000411552 TREHO43280 583 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 CCNT1O60563 726 aaKnown RBP18.46■□□□□ 0.55
NOD1-202ENST00000411552 PSMD10O75832 226 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 GNAT1P11488 350 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 FXR1P51114 621 aaKnown RBP eCLIP18.46■□□□□ 0.55
NOD1-202ENST00000411552 ADAM17P78536 824 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 RBL2Q08999 1139 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 PPFIA1Q13136 1202 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 TRIM71Q2Q1W2 868 aaKnown RBP18.46■□□□□ 0.55
NOD1-202ENST00000411552 SWSAP1Q6NVH7 229 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 AFAP1L1Q8TED9 768 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 VWCEQ96DN2 955 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 TEKT3Q9BXF9 490 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 IL23AQ9NPF7 189 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 NRCAMQ92823 1304 aa18.46■□□□□ 0.55
NOD1-202ENST00000411552 IQCF3P0C7M6 154 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 CKBP12277 381 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 PLCB4Q15147 1175 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 GRIK4Q16099 956 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 TMEM240Q5SV17 173 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 FAM160B1Q5W0V3 765 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 NAP1L4Q99733 375 aaKnown RBP18.45■□□□□ 0.54
NOD1-202ENST00000411552 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.45■□□□□ 0.54
NOD1-202ENST00000411552 UNC45AQ9H3U1 944 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 KCNMB3Q9NPA1 279 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 ZNF302Q9NR11 478 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 TRPC6Q9Y210 931 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 SAMM50Q9Y512 469 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 PCDHA10Q9Y5I2 948 aa18.45■□□□□ 0.54
NOD1-202ENST00000411552 WDR64B1ANS9 1081 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 SOX1O00570 391 aaPredicted RBP18.44■□□□□ 0.54
NOD1-202ENST00000411552 CHMP2AO43633 222 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 PSAPP07602 524 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 INSRRP14616 1297 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 SELPP16109 830 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 SLC26A2P50443 739 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 LRIT3Q3SXY7 679 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 PDXDC2PQ6P474 469 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 ZNF365Q70YC5 407 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 RNPC3Q96LT9 517 aaKnown RBP18.44■□□□□ 0.54
NOD1-202ENST00000411552 FOXP1Q9H334 677 aaPredicted RBP18.44■□□□□ 0.54
NOD1-202ENST00000411552 DISC1Q9NRI5 854 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 KIF3AQ9Y496 699 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 SZT2Q5T011 3432 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 TET1Q8NFU7 2136 aa18.44■□□□□ 0.54
NOD1-202ENST00000411552 POTEB3A0JP26 581 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 WNT7AO00755 349 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 RFC2P35250 354 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 THPOP40225 353 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 IGBP1P78318 339 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 MARCH8Q5T0T0 291 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 ZNF618Q5T7W0 954 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 PSRC1Q6PGN9 363 aaPredicted RBP18.43■□□□□ 0.54
NOD1-202ENST00000411552 POTEBQ6S5H4 581 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 B3GNT9Q6UX72 402 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 LRRC8DQ7L1W4 858 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 DEFB128Q7Z7B8 93 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 HAS1Q92839 578 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 FAM20AQ96MK3 541 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 TUBE1Q9UJT0 475 aa18.43■□□□□ 0.54
NOD1-202ENST00000411552 MAFBQ9Y5Q3 323 aaPredicted RBP18.43■□□□□ 0.54
NOD1-202ENST00000411552 MBLAC1A4D2B0 266 aaPredicted RBP18.42■□□□□ 0.54
NOD1-202ENST00000411552 TBX3O15119 743 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 ATP4AP20648 1035 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 GJB2P29033 226 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 SFNP31947 248 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 JAK3P52333 1124 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 TRAF7Q6Q0C0 670 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 RUFY4Q6ZNE9 571 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 RPUSD2Q8IZ73 545 aaKnown RBP18.42■□□□□ 0.54
NOD1-202ENST00000411552 ATP8B4Q8TF62 1192 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 TRAPPC12Q8WVT3 735 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 GABBR1Q9UBS5 961 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 VAV3Q9UKW4 847 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 IGSF9BQ9UPX0 1349 aa18.42■□□□□ 0.54
NOD1-202ENST00000411552 RRN3P2A6NIE6 340 aa18.41■□□□□ 0.54
NOD1-202ENST00000411552 KIF28PB7ZC32 967 aa18.41■□□□□ 0.54
NOD1-202ENST00000411552 FGBP02675 491 aa18.41■□□□□ 0.54
NOD1-202ENST00000411552 GNL2Q13823 731 aaKnown RBP18.41■□□□□ 0.54
NOD1-202ENST00000411552 GPNMBQ14956 572 aa18.41■□□□□ 0.54
NOD1-202ENST00000411552 MIER3Q7Z3K6 550 aa18.41■□□□□ 0.54
NOD1-202ENST00000411552 NOSTRINQ8IVI9 506 aa18.41■□□□□ 0.54
NOD1-202ENST00000411552 CKAP2LQ8IYA6 745 aa18.41■□□□□ 0.54
NOD1-202ENST00000411552 RDM1Q8NG50 284 aa18.41■□□□□ 0.54
NOD1-202ENST00000411552 TNPO1Q92973 898 aaKnown RBP18.41■□□□□ 0.54
NOD1-202ENST00000411552 ZBTB10Q96DT7 871 aa18.41■□□□□ 0.54
NOD1-202ENST00000411552 SMC3Q9UQE7 1217 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms