RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 PICK1Q9NRD5 415 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 EEF2P13639 858 aaKnown RBP18.3■□□□□ 0.52
PDK1-203ENST00000410055 RNASE9P60153 205 aaKnown RBP18.3■□□□□ 0.52
PDK1-203ENST00000410055 PRR16Q569H4 304 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 SLC30A10Q6XR72 485 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 TMX4Q9H1E5 349 aaPredicted RBP18.3■□□□□ 0.52
PDK1-203ENST00000410055 PLAGL2Q9UPG8 496 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 SIK3Q9Y2K2 1263 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 POTEFA5A3E0 1075 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 FGFR1OPO95684 399 aaKnown RBP18.3■□□□□ 0.52
PDK1-203ENST00000410055 POTEIP0CG38 1075 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 SMARCA1P28370 1054 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 EPS15P42566 896 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 GNGT1P63211 74 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 SLC7A5Q01650 507 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 PTPROQ16827 1216 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 NFRKBQ6P4R8 1299 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 POTEGQ6S5H5 508 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 POTEEQ6S8J3 1075 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 AFF2P51816 1311 aa18.29■□□□□ 0.52
PDK1-203ENST00000410055 TACC1O75410 805 aa18.29■□□□□ 0.52
PDK1-203ENST00000410055 PYGLP06737 847 aa18.29■□□□□ 0.52
PDK1-203ENST00000410055 ADRA2BP18089 450 aa18.29■□□□□ 0.52
PDK1-203ENST00000410055 CDC25CP30307 473 aa18.29■□□□□ 0.52
PDK1-203ENST00000410055 PPP1R2P41236 205 aa18.29■□□□□ 0.52
PDK1-203ENST00000410055 USP14P54578 494 aa18.29■□□□□ 0.52
PDK1-203ENST00000410055 POLR2FP61218 127 aaKnown RBP18.29■□□□□ 0.52
PDK1-203ENST00000410055 CYP4A11Q02928 519 aa18.29■□□□□ 0.52
PDK1-203ENST00000410055 PDIA5Q14554 519 aa18.29■□□□□ 0.52
PDK1-203ENST00000410055 RBBP5Q15291 538 aaKnown RBP18.29■□□□□ 0.52
PDK1-203ENST00000410055 EZH2Q15910 746 aaKnown RBP18.29■□□□□ 0.52
PDK1-203ENST00000410055 GBP3Q9H0R5 595 aa18.29■□□□□ 0.52
PDK1-203ENST00000410055 SNUPNO95149 360 aaKnown RBP18.29■□□□□ 0.52
PDK1-203ENST00000410055 CCDC84Q86UT8 332 aaPredicted RBP18.29■□□□□ 0.52
PDK1-203ENST00000410055 SPICE1Q8N0Z3 855 aa18.29■□□□□ 0.52
PDK1-203ENST00000410055 PLA2G4BP0C869 781 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 GGCXP38435 758 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 RPS6KA3P51812 740 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 PABPC4Q13310 644 aaKnown RBP eCLIP18.28■□□□□ 0.52
PDK1-203ENST00000410055 SEPT2Q15019 361 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 PAPD7Q5XG87 772 aaKnown RBP18.28■□□□□ 0.52
PDK1-203ENST00000410055 SP8Q8IXZ3 490 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 FAM76AQ8TAV0 307 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 DDTLA6NHG4 134 aaPredicted RBP18.28■□□□□ 0.52
PDK1-203ENST00000410055 SNHG28P0DPA3 235 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 WLSQ5T9L3 541 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 THEMIS2Q5TEJ8 643 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 CCDC181Q5TID7 509 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 SLFN13Q68D06 897 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 APOBEC3HQ6NTF7 200 aaKnown RBP18.28■□□□□ 0.52
PDK1-203ENST00000410055 LRRC55Q6ZSA7 311 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 DNAJC19Q96DA6 116 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 CRAMP1Q96RY5 1269 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 LSM14BQ9BX40 385 aaKnown RBP18.28■□□□□ 0.52
PDK1-203ENST00000410055 ATP6V0A2Q9Y487 856 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 CDK5RAP2Q96SN8 1893 aa18.28■□□□□ 0.52
PDK1-203ENST00000410055 HOXA13P31271 388 aaPredicted RBP18.27■□□□□ 0.52
PDK1-203ENST00000410055 FKBP3Q00688 224 aaKnown RBP18.27■□□□□ 0.52
PDK1-203ENST00000410055 RAPGEF1Q13905 1077 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 CERKLQ49MI3 558 aaPredicted RBP18.27■□□□□ 0.52
PDK1-203ENST00000410055 TRIM74Q86UV6 250 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 TRIM73Q86UV7 250 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 DNAAF5Q86Y56 855 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 HDAC7Q8WUI4 952 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 SALL4Q9UJQ4 1053 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 COL4A3BPQ9Y5P4 624 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 LTBP4Q8N2S1 1624 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 NDUFAB1O14561 156 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 CRKP46108 304 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 LRRC63Q05C16 580 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 CDC37Q16543 378 aaPredicted RBP18.27■□□□□ 0.52
PDK1-203ENST00000410055 GPATCH4Q5T3I0 446 aaKnown RBP18.27■□□□□ 0.52
PDK1-203ENST00000410055 FAM210AQ96ND0 272 aa18.27■□□□□ 0.52
PDK1-203ENST00000410055 PAIP2Q9BPZ3 127 aaKnown RBP18.27■□□□□ 0.52
PDK1-203ENST00000410055 hCG_1984214I3L0E3 225 aa18.27■□□□□ 0.51
PDK1-203ENST00000410055 HOXA10P31260 410 aaPredicted RBP18.27■□□□□ 0.51
PDK1-203ENST00000410055 PSMC6P62333 389 aa18.27■□□□□ 0.51
PDK1-203ENST00000410055 CKAP4Q07065 602 aaKnown RBP18.27■□□□□ 0.51
PDK1-203ENST00000410055 KCTD19Q17RG1 926 aaPredicted RBP18.27■□□□□ 0.51
PDK1-203ENST00000410055 ZNF713Q8N859 430 aaPredicted RBP18.27■□□□□ 0.51
PDK1-203ENST00000410055 C3orf20Q8ND61 904 aa18.27■□□□□ 0.51
PDK1-203ENST00000410055 CAPS2Q9BXY5 557 aa18.27■□□□□ 0.51
PDK1-203ENST00000410055 ANO3Q9BYT9 981 aa18.27■□□□□ 0.51
PDK1-203ENST00000410055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.27■□□□□ 0.51
PDK1-203ENST00000410055 KCNMA1Q12791 1236 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 TRAF1Q13077 416 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 PPP4R3AQ6IN85 833 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 BCAS3Q9H6U6 928 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 DNAJC18Q9H819 358 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 IGKV6D-41A0A0C4DH26 115 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 GOLGA6CA6NDK9 693 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 MED24O75448 989 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 GOLGA6DP0CG33 693 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 CDR1P51861 262 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 TMEM119Q4V9L6 283 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 CCDC65Q8IXS2 484 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 TRIM58Q8NG06 486 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 GOLGA6AQ9NYA3 693 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 SWAP70Q9UH65 585 aa18.26■□□□□ 0.51
PDK1-203ENST00000410055 EZRP15311 586 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms