RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 GNASQ5JWF2 1037 aa17.09■□□□□ 0.33
LSM5-207ENST00000410044 SWSAP1Q6NVH7 229 aa17.09■□□□□ 0.33
LSM5-207ENST00000410044 SHC4Q6S5L8 630 aa17.09■□□□□ 0.33
LSM5-207ENST00000410044 PCSK9Q8NBP7 692 aaKnown RBP17.09■□□□□ 0.33
LSM5-207ENST00000410044 C16orf70Q9BSU1 422 aa17.09■□□□□ 0.33
LSM5-207ENST00000410044 SMARCAD1Q9H4L7 1026 aa17.09■□□□□ 0.33
LSM5-207ENST00000410044 SAMM50Q9Y512 469 aa17.09■□□□□ 0.33
LSM5-207ENST00000410044 FAM237AA0A1B0GTK4 181 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.32
LSM5-207ENST00000410044 LGALS2P05162 132 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 UBA7P41226 1012 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 QARSP47897 775 aaKnown RBP17.08■□□□□ 0.32
LSM5-207ENST00000410044 GJA8P48165 433 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 SLC26A2P50443 739 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 STAT5BP51692 787 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 PSMC5P62195 406 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 BEX3Q00994 111 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 SP4Q02446 784 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 FAM160B1Q5W0V3 765 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 RESP18Q5W5W9 173 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 KRT79Q5XKE5 535 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 HAUS3Q68CZ6 603 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 CATSPER3Q86XQ3 398 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 CCDC60Q8IWA6 550 aaPredicted RBP17.08■□□□□ 0.32
LSM5-207ENST00000410044 C4orf19Q8IY42 314 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 ZNF302Q9NR11 478 aa17.08■□□□□ 0.32
LSM5-207ENST00000410044 IGSF9BQ9UPX0 1349 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 MOXD2PA6NHM9 499 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 PP2D1A8MPX8 630 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 HAS3O00219 553 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 MED24O75448 989 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 STBD1O95210 358 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 XRCC6P12956 609 aaKnown RBP eCLIP17.07■□□□□ 0.32
LSM5-207ENST00000410044 ATP4AP20648 1035 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 CDC25AP30304 524 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 PURAQ00577 322 aaKnown RBP17.07■□□□□ 0.32
LSM5-207ENST00000410044 KCNA10Q16322 511 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 USP49Q70CQ1 688 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 CABP7Q86V35 215 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 U2AF1L4Q8WU68 220 aaKnown RBP17.07■□□□□ 0.32
LSM5-207ENST00000410044 DYDC2Q96IM9 177 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 EPSTI1Q96J88 318 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 AZI2Q9H6S1 392 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 ZSWIM4Q9H7M6 989 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 RGL1Q9NZL6 768 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 GABBR1Q9UBS5 961 aa17.07■□□□□ 0.32
LSM5-207ENST00000410044 H3BRB1 525 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 DNM1LO00429 736 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 CABYRO75952 493 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 F2P00734 622 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 CCT6AP40227 531 aaKnown RBP17.06■□□□□ 0.32
LSM5-207ENST00000410044 SPECC1Q5M775 1068 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 UTP14CQ5TAP6 766 aaKnown RBP17.06■□□□□ 0.32
LSM5-207ENST00000410044 ANKLE1Q8NAG6 615 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 SNX29Q8TEQ0 813 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 SYMPKQ92797 1274 aaKnown RBP17.06■□□□□ 0.32
LSM5-207ENST00000410044 KAT2BQ92831 832 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 ATP6V0A1Q93050 837 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 TMEM106CQ9BVX2 250 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 NT5C3AQ9H0P0 336 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 TUT1Q9H6E5 874 aaKnown RBP17.06■□□□□ 0.32
LSM5-207ENST00000410044 ERAP1Q9NZ08 941 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 SCN10AQ9Y5Y9 1956 aa17.06■□□□□ 0.32
LSM5-207ENST00000410044 KDM3AQ9Y4C1 1321 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 BACH1O14867 736 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 ZNF862O60290 1169 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 MYCP01106 439 aaPredicted RBP17.05■□□□□ 0.32
LSM5-207ENST00000410044 ASGR1P07306 291 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 MNX1P50219 401 aaPredicted RBP17.05■□□□□ 0.32
LSM5-207ENST00000410044 ACLYP53396 1101 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 GRB10Q13322 594 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 CTTNQ14247 550 aaKnown RBP17.05■□□□□ 0.32
LSM5-207ENST00000410044 ECM1Q16610 540 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 UGCGQ16739 394 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 TMEM119Q4V9L6 283 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 COL13A1Q5TAT6 717 aaPredicted RBP17.05■□□□□ 0.32
LSM5-207ENST00000410044 TPH2Q8IWU9 490 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 BANK1Q8NDB2 785 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 GLG1Q92896 1179 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 PNMA5Q96PV4 448 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 LXNQ9BS40 222 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 MTG1Q9BT17 334 aaPredicted RBP17.05■□□□□ 0.32
LSM5-207ENST00000410044 WRAP73Q9P2S5 460 aaPredicted RBP17.05■□□□□ 0.32
LSM5-207ENST00000410044 PHF24Q9UPV7 400 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 HPSEQ9Y251 543 aa17.05■□□□□ 0.32
LSM5-207ENST00000410044 PRPF40AO75400 957 aaKnown RBP17.04■□□□□ 0.32
LSM5-207ENST00000410044 TFRCP02786 760 aaKnown RBP17.04■□□□□ 0.32
LSM5-207ENST00000410044 MYL3P08590 195 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 TXLNAP40222 546 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 CYP4A11Q02928 519 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 XKR3Q5GH77 459 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 PDXDC2PQ6P474 469 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 CALML4Q96GE6 196 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 KATNAL1Q9BW62 490 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 NIFKQ9BYG3 293 aaKnown RBP17.04■□□□□ 0.32
LSM5-207ENST00000410044 NRBP2Q9NSY0 501 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 LMBRD1Q9NUN5 540 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 FAM13BQ9NYF5 915 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 CCDC39Q9UFE4 941 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms