RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 FOSL2P15408 326 aa20.14■□□□□ 0.81
LSM5-204ENST00000409909 NLRP5P59047 1200 aa20.14■□□□□ 0.81
LSM5-204ENST00000409909 GRIK4Q16099 956 aa20.14■□□□□ 0.81
LSM5-204ENST00000409909 TMCO2Q7Z6W1 182 aaPredicted RBP20.14■□□□□ 0.81
LSM5-204ENST00000409909 HERC6Q8IVU3 1022 aa20.14■□□□□ 0.81
LSM5-204ENST00000409909 PRDM12Q9H4Q4 367 aa20.14■□□□□ 0.81
LSM5-204ENST00000409909 REV3LO60673 3130 aa20.14■□□□□ 0.81
LSM5-204ENST00000409909 IGKV6D-21A0A0A0MT36 114 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 MBLAC1A4D2B0 266 aaPredicted RBP20.13■□□□□ 0.81
LSM5-204ENST00000409909 IPO5O00410 1097 aaKnown RBP20.13■□□□□ 0.81
LSM5-204ENST00000409909 PFKFB2O60825 505 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 CAND2O75155 1236 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 CIITAP33076 1130 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 AK2P54819 239 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 DEFB103AP81534 67 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 NPY5RQ15761 445 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 ABHD15Q6UXT9 468 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 PLPPR4Q7Z2D5 763 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 LENG9Q96B70 501 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 ZBTB10Q96DT7 871 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 SLKQ9H2G2 1235 aaPredicted RBP20.13■□□□□ 0.81
LSM5-204ENST00000409909 AZI2Q9H6S1 392 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 PCDHA4Q9UN74 947 aa20.13■□□□□ 0.81
LSM5-204ENST00000409909 ABHD14A-ACY1A0A1B0GW23 586 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 M0R2N6 131 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 CA3P07451 260 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 INSRRP14616 1297 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 KCNJ6P48051 423 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 STAT5BP51692 787 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 MKRN4PQ13434 485 aaPredicted RBP20.12■□□□□ 0.81
LSM5-204ENST00000409909 IKBKEQ14164 716 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 PLCB4Q15147 1175 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 PRR16Q569H4 304 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 PLEKHG4Q58EX7 1191 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 FAM26DQ5JW98 314 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 CPLX2Q6PUV4 134 aaKnown RBP20.12■□□□□ 0.81
LSM5-204ENST00000409909 DBF4BQ8NFT6 615 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 MAFAQ8NHW3 353 aaPredicted RBP20.12■□□□□ 0.81
LSM5-204ENST00000409909 ZNF577Q9BSK1 485 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 TUBE1Q9UJT0 475 aa20.12■□□□□ 0.81
LSM5-204ENST00000409909 ARHGEF15O94989 841 aa20.11■□□□□ 0.81
LSM5-204ENST00000409909 CTDNEP1O95476 244 aa20.11■□□□□ 0.81
LSM5-204ENST00000409909 CHRNA1P02708 482 aa20.11■□□□□ 0.81
LSM5-204ENST00000409909 IGBP1P78318 339 aa20.11■□□□□ 0.81
LSM5-204ENST00000409909 SETQ01105 290 aaPredicted RBP20.11■□□□□ 0.81
LSM5-204ENST00000409909 PPP2R2DQ66LE6 453 aa20.11■□□□□ 0.81
LSM5-204ENST00000409909 RPAINQ86UA6 219 aa20.11■□□□□ 0.81
LSM5-204ENST00000409909 USP11P51784 963 aa20.1■□□□□ 0.81
LSM5-204ENST00000409909 ADGRE1Q14246 886 aa20.1■□□□□ 0.81
LSM5-204ENST00000409909 TAF2Q6P1X5 1199 aa20.1■□□□□ 0.81
LSM5-204ENST00000409909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.1■□□□□ 0.811e-10■■■□□ 17.1
LSM5-204ENST00000409909 BLIDQ8IZY5 108 aa20.1■□□□□ 0.81
LSM5-204ENST00000409909 DAGLBQ8NCG7 672 aa20.1■□□□□ 0.81
LSM5-204ENST00000409909 TRAPPC12Q8WVT3 735 aa20.1■□□□□ 0.81
LSM5-204ENST00000409909 TBC1D22BQ9NU19 505 aa20.1■□□□□ 0.81
LSM5-204ENST00000409909 TRPC6Q9Y210 931 aa20.1■□□□□ 0.81
LSM5-204ENST00000409909 VCANP13611 3396 aa20.09■□□□□ 0.81
LSM5-204ENST00000409909 POTEB3A0JP26 581 aa20.09■□□□□ 0.81
LSM5-204ENST00000409909 RRN3P2A6NIE6 340 aa20.09■□□□□ 0.81
LSM5-204ENST00000409909 CDKL5O76039 1030 aa20.09■□□□□ 0.81
LSM5-204ENST00000409909 LARGE1O95461 756 aa20.09■□□□□ 0.81
LSM5-204ENST00000409909 ANKRD1Q15327 319 aa20.09■□□□□ 0.81
LSM5-204ENST00000409909 POTEBQ6S5H4 581 aa20.09■□□□□ 0.81
LSM5-204ENST00000409909 CCDC60Q8IWA6 550 aaPredicted RBP20.09■□□□□ 0.81
LSM5-204ENST00000409909 FAM177A1Q8N128 213 aaPredicted RBP20.09■□□□□ 0.81
LSM5-204ENST00000409909 TBCKQ8TEA7 893 aa20.09■□□□□ 0.81
LSM5-204ENST00000409909 DNAJB3Q8WWF6 145 aa20.09■□□□□ 0.81
LSM5-204ENST00000409909 KCNJ14Q9UNX9 436 aa20.09■□□□□ 0.81
LSM5-204ENST00000409909 KIF28PB7ZC32 967 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 BACH1O14867 736 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 MSH4O15457 936 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 TLL1O43897 1013 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 EFCAB14O75071 495 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 ATP4AP20648 1035 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 SLC26A2P50443 739 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 NEK4P51957 841 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 TAP1Q03518 808 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 MGAT3Q09327 533 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 ME3Q16798 604 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 SWSAP1Q6NVH7 229 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 MIS18BP1Q6P0N0 1132 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 NECAB1Q8N987 351 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 SEPT8Q92599 483 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 PHF20Q9BVI0 1012 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 GJB4Q9NTQ9 266 aa20.08■□□□□ 0.81
LSM5-204ENST00000409909 MICAL3Q7RTP6 2002 aa20.08■□□□□ 0.8
LSM5-204ENST00000409909 STK36Q9NRP7 1315 aa20.07■□□□□ 0.8
LSM5-204ENST00000409909 SIP14410 1827 aa20.07■□□□□ 0.8
LSM5-204ENST00000409909 LCHNA4D1U4 455 aa20.07■□□□□ 0.8
LSM5-204ENST00000409909 EIF5BO60841 1220 aaKnown RBP20.07■□□□□ 0.8
LSM5-204ENST00000409909 GJB5O95377 273 aa20.07■□□□□ 0.8
LSM5-204ENST00000409909 FAM160B1Q5W0V3 765 aa20.07■□□□□ 0.8
LSM5-204ENST00000409909 GALNT17Q6IS24 598 aa20.07■□□□□ 0.8
LSM5-204ENST00000409909 ZNF746Q6NUN9 644 aaPredicted RBP20.07■□□□□ 0.8
LSM5-204ENST00000409909 SPRED2Q7Z698 418 aa20.07■□□□□ 0.8
LSM5-204ENST00000409909 GJA10Q969M2 543 aa20.07■□□□□ 0.8
LSM5-204ENST00000409909 GAS2L1Q99501 681 aaPredicted RBP20.07■□□□□ 0.8
LSM5-204ENST00000409909 ZBED2Q9BTP6 218 aa20.07■□□□□ 0.8
LSM5-204ENST00000409909 CERS4Q9HA82 394 aa20.07■□□□□ 0.8
LSM5-204ENST00000409909 ZNF302Q9NR11 478 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms