RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 ATP6V0A1Q93050 837 aa23.16■■□□□ 1.3
C4orf48-202ENST00000409860 EIF2AK1Q9BQI3 630 aaKnown RBP23.16■■□□□ 1.3
C4orf48-202ENST00000409860 KATNAL1Q9BW62 490 aa23.16■■□□□ 1.3
C4orf48-202ENST00000409860 GABBR1Q9UBS5 961 aa23.16■■□□□ 1.3
C4orf48-202ENST00000409860 PHF24Q9UPV7 400 aa23.16■■□□□ 1.3
C4orf48-202ENST00000409860 DKC1O60832 514 aaKnown RBP eCLIP23.15■■□□□ 1.3
C4orf48-202ENST00000409860 CUTAO60888 179 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 F2P00734 622 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 P4HBP07237 508 aaKnown RBP23.15■■□□□ 1.3
C4orf48-202ENST00000409860 GRIN1Q05586 938 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 CSPP1Q1MSJ5 1256 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 KRT79Q5XKE5 535 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 PDXDC2PQ6P474 469 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 PLPPR4Q7Z2D5 763 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 TRIM50Q86XT4 487 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 PCYT2Q99447 389 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 C16orf70Q9BSU1 422 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 CSRNP2Q9H175 543 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 ERAP1Q9NZ08 941 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 DOCK5Q9H7D0 1870 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 FRMPD3Q5JV73 1810 aa23.15■■□□□ 1.3
C4orf48-202ENST00000409860 IGSF9BQ9UPX0 1349 aa23.14■■□□□ 1.3
C4orf48-202ENST00000409860 SLC26A2P50443 739 aa23.14■■□□□ 1.29
C4orf48-202ENST00000409860 PSMC5P62195 406 aa23.14■■□□□ 1.29
C4orf48-202ENST00000409860 BANK1Q8NDB2 785 aa23.14■■□□□ 1.29
C4orf48-202ENST00000409860 SNX29Q8TEQ0 813 aa23.14■■□□□ 1.29
C4orf48-202ENST00000409860 DYDC2Q96IM9 177 aa23.14■■□□□ 1.29
C4orf48-202ENST00000409860 GLT1D1Q96MS3 346 aa23.14■■□□□ 1.29
C4orf48-202ENST00000409860 CLIC6Q96NY7 704 aa23.14■■□□□ 1.29
C4orf48-202ENST00000409860 GDPD2Q9HCC8 539 aa23.14■■□□□ 1.29
C4orf48-202ENST00000409860 MAFBQ9Y5Q3 323 aaPredicted RBP23.14■■□□□ 1.29
C4orf48-202ENST00000409860 PP2D1A8MPX8 630 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 H3BRB1 525 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 CCT6AP40227 531 aaKnown RBP23.13■■□□□ 1.29
C4orf48-202ENST00000409860 UBA7P41226 1012 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 QARSP47897 775 aaKnown RBP23.13■■□□□ 1.29
C4orf48-202ENST00000409860 CYP4A11Q02928 519 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 MFSD10Q14728 455 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 CKAP2LQ8IYA6 745 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 ZNF579Q8NAF0 562 aaKnown RBP23.13■■□□□ 1.29
C4orf48-202ENST00000409860 KAT2BQ92831 832 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 VTI1AQ96AJ9 217 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 HSD17B14Q9BPX1 270 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 LXNQ9BS40 222 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 POLR3CQ9BUI4 534 aaPredicted RBP23.13■■□□□ 1.29
C4orf48-202ENST00000409860 TUT1Q9H6E5 874 aaKnown RBP23.13■■□□□ 1.29
C4orf48-202ENST00000409860 TUFT1Q9NNX1 390 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 RGL1Q9NZL6 768 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 PCDHA7Q9UN72 937 aa23.13■■□□□ 1.29
C4orf48-202ENST00000409860 A0A1W2PQ45 241 aaPredicted RBP23.12■■□□□ 1.29
C4orf48-202ENST00000409860 A0A1W2PQY0 241 aa23.12■■□□□ 1.29
C4orf48-202ENST00000409860 MARK3P27448 753 aa23.12■■□□□ 1.29
C4orf48-202ENST00000409860 TXLNAP40222 546 aa23.12■■□□□ 1.29
C4orf48-202ENST00000409860 PSEN2P49810 448 aa23.12■■□□□ 1.29
C4orf48-202ENST00000409860 CTTNQ14247 550 aaKnown RBP23.12■■□□□ 1.29
C4orf48-202ENST00000409860 UGCGQ16739 394 aa23.12■■□□□ 1.29
C4orf48-202ENST00000409860 TPH2Q8IWU9 490 aa23.12■■□□□ 1.29
C4orf48-202ENST00000409860 FAM167AQ96KS9 214 aa23.12■■□□□ 1.29
C4orf48-202ENST00000409860 ZSWIM4Q9H7M6 989 aa23.12■■□□□ 1.29
C4orf48-202ENST00000409860 STARD7Q9NQZ5 370 aa23.12■■□□□ 1.29
C4orf48-202ENST00000409860 KIAA0100Q14667 2235 aaKnown RBP23.12■■□□□ 1.29
C4orf48-202ENST00000409860 CENPFP49454 3210 aa23.12■■□□□ 1.29
C4orf48-202ENST00000409860 KDM3AQ9Y4C1 1321 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 CCDC85CA6NKD9 419 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 SLC26A4O43511 780 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 SLITRK3O94933 977 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 EN2P19622 333 aaPredicted RBP23.11■■□□□ 1.29
C4orf48-202ENST00000409860 RPA1P27694 616 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 CDC25AP30304 524 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 MNX1P50219 401 aaPredicted RBP23.11■■□□□ 1.29
C4orf48-202ENST00000409860 CHMP4BP1P59074 171 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 PRKCEQ02156 737 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 KIAA0753Q2KHM9 967 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 AXDND1Q5T1B0 1012 aaPredicted RBP23.11■■□□□ 1.29
C4orf48-202ENST00000409860 CABP7Q86V35 215 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 RASSF8Q8NHQ8 419 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 GBP4Q96PP9 640 aa23.11■■□□□ 1.29
C4orf48-202ENST00000409860 HAS3O00219 553 aa23.1■■□□□ 1.29
C4orf48-202ENST00000409860 MED24O75448 989 aa23.1■■□□□ 1.29
C4orf48-202ENST00000409860 MUTP22033 750 aa23.1■■□□□ 1.29
C4orf48-202ENST00000409860 SPECC1Q5M775 1068 aa23.1■■□□□ 1.29
C4orf48-202ENST00000409860 CATSPER3Q86XQ3 398 aa23.1■■□□□ 1.29
C4orf48-202ENST00000409860 C4orf19Q8IY42 314 aa23.1■■□□□ 1.29
C4orf48-202ENST00000409860 ATP8B4Q8TF62 1192 aa23.1■■□□□ 1.29
C4orf48-202ENST00000409860 SYMPKQ92797 1274 aaKnown RBP23.1■■□□□ 1.29
C4orf48-202ENST00000409860 CDK5RAP3Q96JB5 506 aa23.1■■□□□ 1.29
C4orf48-202ENST00000409860 TRPC6Q9Y210 931 aa23.1■■□□□ 1.29
C4orf48-202ENST00000409860 A0A0U1RQG5 324 aaPredicted RBP23.09■■□□□ 1.29
C4orf48-202ENST00000409860 ZNF862O60290 1169 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 LYPLA2O95372 231 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 OATP04181 439 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 SPATA31C1P0DKV0 1188 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 PSMC6P62333 389 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 PLCB4Q15147 1175 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 ZRSR1Q15695 479 aaKnown RBP23.09■■□□□ 1.29
C4orf48-202ENST00000409860 ADALQ6DHV7 355 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 CLEC17AQ6ZS10 378 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 DIS3LQ8TF46 1054 aaKnown RBP23.09■■□□□ 1.29
C4orf48-202ENST00000409860 CALML4Q96GE6 196 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 MMTAG2Q9BU76 263 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms