RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 STIM1Q13586 685 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 DHX8Q14562 1220 aaKnown RBP6.14□□□□□ -1.43
EPHA4-202ENST00000409854 STXBP2Q15833 593 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 GNPTABQ3T906 1256 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 TTI2Q6NXR4 508 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 RASAL3Q86YV0 1011 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 GUF1Q8N442 669 aaKnown RBP6.14□□□□□ -1.43
EPHA4-202ENST00000409854 NACC1Q96RE7 527 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 LXNQ9BS40 222 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 XPO4Q9C0E2 1151 aaKnown RBP6.14□□□□□ -1.43
EPHA4-202ENST00000409854 ZCCHC17Q9NP64 241 aaKnown RBP6.14□□□□□ -1.43
EPHA4-202ENST00000409854 SAMSN1Q9NSI8 373 aaKnown RBP6.14□□□□□ -1.43
EPHA4-202ENST00000409854 BMP2KQ9NSY1 1161 aaPredicted RBP6.14□□□□□ -1.43
EPHA4-202ENST00000409854 PANK4Q9NVE7 773 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 DBR1Q9UK59 544 aaKnown RBP6.14□□□□□ -1.43
EPHA4-202ENST00000409854 ZSWIM8A7E2V4 1837 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 WDR64B1ANS9 1081 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 POTEB2H3BUK9 544 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 PSMA7O14818 248 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 CYP2C8P10632 490 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 CCNE1P24864 410 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 TAF3Q5VWG9 929 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 CENPPQ6IPU0 288 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 KLHL10Q6JEL2 608 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 RINT1Q6NUQ1 792 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 C1orf186Q6ZWK4 172 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 CCDC65Q8IXS2 484 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 SMAP1Q8IYB5 467 aaPredicted RBP6.14□□□□□ -1.43
EPHA4-202ENST00000409854 TRIM44Q96DX7 344 aaPredicted RBP6.14□□□□□ -1.43
EPHA4-202ENST00000409854 PTPN18Q99952 460 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 BHMT2Q9H2M3 363 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 IFNKQ9P0W0 207 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 DCAF8L1A6NGE4 600 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 LRRC10BA6NIK2 292 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 DDX39AO00148 427 aaKnown RBP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 CBFA2T2O43439 604 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 TPM3P06753 285 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 QARSP47897 775 aaKnown RBP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 PMS1P54277 932 aaKnown RBP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 STX17P56962 302 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 FSTL1Q12841 308 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 TPH2Q8IWU9 490 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 C4orf19Q8IY42 314 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 ABRAQ8N0Z2 381 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 BANK1Q8NDB2 785 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 GPRC5AQ8NFJ5 357 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 P2RX5Q93086 422 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 MMP19Q99542 508 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 DUSP9Q99956 384 aaKnown RBP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 REEP2Q9BRK0 252 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 RUSC1Q9BVN2 902 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 ZSWIM4Q9H7M6 989 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 INTS13Q9NVM9 706 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 LIMA1Q9UHB6 759 aaKnown RBP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 NPHP3-ACAD11A0A0J9YXS1 232 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 A0A1B0GTH6 734 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 BICDL2A1A5D9 508 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 GOLGA6L6A8MZA4 724 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 GUCY2CP25092 1073 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 ZNF131P52739 623 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 FAM26FQ5R3K3 315 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 EPM2AIP1Q7L775 607 aaPredicted RBP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 NOC3LQ8WTT2 800 aaKnown RBP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 HPS3Q969F9 1004 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 PARK7Q99497 189 aaKnown RBP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 PORCNQ9H237 461 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 SEMA6BQ9H3T3 888 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 THAP9Q9H5L6 903 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 SLC39A2Q9NP94 309 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 PKD2L1Q9P0L9 805 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 IMPACTQ9P2X3 320 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 ODF2LQ9ULJ1 636 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 IGSF9BQ9UPX0 1349 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 TRIM49BA6NDI0 452 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 B4DLN1 442 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 ATG7O95352 703 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 SSBP05455 408 aaKnown RBP eCLIP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 IDEP14735 1019 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 HUNKP57058 714 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 PSMC5P62195 406 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 CCNA1P78396 465 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 SP2Q02086 613 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 SPAG1Q07617 926 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 KCTD2Q14681 263 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 UGCGQ16739 394 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 BMT2Q1RMZ1 405 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 ZCWPW2Q504Y3 356 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 UTP14CQ5TAP6 766 aaKnown RBP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 IRF2BP1Q8IU81 584 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 PIGOQ8TEQ8 1089 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 JPH1Q9HDC5 661 aaPredicted RBP6.13□□□□□ -1.43
EPHA4-202ENST00000409854 OLFML3Q9NRN5 406 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 MAPK8IP1Q9UQF2 711 aa6.13□□□□□ -1.43
EPHA4-202ENST00000409854 STBD1O95210 358 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 SLC10A3P09131 477 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 TGFB3P10600 412 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 GAP43P17677 238 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 UBASH3AP57075 661 aa6.12□□□□□ -1.43
EPHA4-202ENST00000409854 LRRC63Q05C16 580 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms