RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SCLYQ96I15 445 aa35.26■■■■□ 3.24
TRAF3IP1-203ENST00000409739 STAT5BP51692 787 aa35.25■■■■□ 3.23
TRAF3IP1-203ENST00000409739 RBL2Q08999 1139 aa35.25■■■■□ 3.23
TRAF3IP1-203ENST00000409739 SAFBQ15424 915 aaKnown RBP eCLIP35.25■■■■□ 3.23
TRAF3IP1-203ENST00000409739 MIS18BP1Q6P0N0 1132 aa35.25■■■■□ 3.23
TRAF3IP1-203ENST00000409739 PLPPR4Q7Z2D5 763 aa35.25■■■■□ 3.23
TRAF3IP1-203ENST00000409739 SERINC5Q86VE9 423 aa35.25■■■■□ 3.23
TRAF3IP1-203ENST00000409739 SMAP1Q8IYB5 467 aaPredicted RBP35.25■■■■□ 3.23
TRAF3IP1-203ENST00000409739 TREHO43280 583 aa35.24■■■■□ 3.23
TRAF3IP1-203ENST00000409739 CCNT1O60563 726 aaKnown RBP35.24■■■■□ 3.23
TRAF3IP1-203ENST00000409739 PSMD10O75832 226 aa35.24■■■■□ 3.23
TRAF3IP1-203ENST00000409739 ADAM17P78536 824 aa35.24■■■■□ 3.23
TRAF3IP1-203ENST00000409739 TRIM71Q2Q1W2 868 aaKnown RBP35.24■■■■□ 3.23
TRAF3IP1-203ENST00000409739 AFAP1L1Q8TED9 768 aa35.24■■■■□ 3.23
TRAF3IP1-203ENST00000409739 NAP1L4Q99733 375 aaKnown RBP35.24■■■■□ 3.23
TRAF3IP1-203ENST00000409739 TEKT3Q9BXF9 490 aa35.24■■■■□ 3.23
TRAF3IP1-203ENST00000409739 IL23AQ9NPF7 189 aa35.24■■■■□ 3.23
TRAF3IP1-203ENST00000409739 SIP14410 1827 aa35.24■■■■□ 3.23
TRAF3IP1-203ENST00000409739 NRCAMQ92823 1304 aa35.24■■■■□ 3.23
TRAF3IP1-203ENST00000409739 BACH1O14867 736 aa35.23■■■■□ 3.23
TRAF3IP1-203ENST00000409739 GNAT1P11488 350 aa35.23■■■■□ 3.23
TRAF3IP1-203ENST00000409739 PPFIA1Q13136 1202 aa35.23■■■■□ 3.23
TRAF3IP1-203ENST00000409739 FAM160B1Q5W0V3 765 aa35.23■■■■□ 3.23
TRAF3IP1-203ENST00000409739 C16orf59Q7L2K0 433 aa35.23■■■■□ 3.23
TRAF3IP1-203ENST00000409739 RETREG2Q8NC44 543 aa35.23■■■■□ 3.23
TRAF3IP1-203ENST00000409739 EVPLQ92817 2033 aa35.23■■■■□ 3.23
TRAF3IP1-203ENST00000409739 ACRP10323 421 aa35.22■■■■□ 3.23
TRAF3IP1-203ENST00000409739 PLCB4Q15147 1175 aa35.22■■■■□ 3.23
TRAF3IP1-203ENST00000409739 BUD13Q9BRD0 619 aaKnown RBP eCLIP35.22■■■■□ 3.239e-12■■□□□ 13.6
TRAF3IP1-203ENST00000409739 UNC45AQ9H3U1 944 aa35.22■■■■□ 3.23
TRAF3IP1-203ENST00000409739 KCNMB3Q9NPA1 279 aa35.22■■■■□ 3.23
TRAF3IP1-203ENST00000409739 ZNF302Q9NR11 478 aa35.22■■■■□ 3.23
TRAF3IP1-203ENST00000409739 PCDHA10Q9Y5I2 948 aa35.22■■■■□ 3.23
TRAF3IP1-203ENST00000409739 WDR64B1ANS9 1081 aa35.21■■■■□ 3.23
TRAF3IP1-203ENST00000409739 IQCF3P0C7M6 154 aa35.21■■■■□ 3.23
TRAF3IP1-203ENST00000409739 CKBP12277 381 aa35.21■■■■□ 3.23
TRAF3IP1-203ENST00000409739 SLC26A2P50443 739 aa35.21■■■■□ 3.23
TRAF3IP1-203ENST00000409739 FXR1P51114 621 aaKnown RBP eCLIP35.21■■■■□ 3.23
TRAF3IP1-203ENST00000409739 GRIK4Q16099 956 aa35.21■■■■□ 3.23
TRAF3IP1-203ENST00000409739 VWCEQ96DN2 955 aa35.21■■■■□ 3.23
TRAF3IP1-203ENST00000409739 TRPC6Q9Y210 931 aa35.21■■■■□ 3.23
TRAF3IP1-203ENST00000409739 CHMP2AO43633 222 aa35.2■■■■□ 3.23
TRAF3IP1-203ENST00000409739 PSAPP07602 524 aa35.2■■■■□ 3.23
TRAF3IP1-203ENST00000409739 TMEM240Q5SV17 173 aa35.2■■■■□ 3.23
TRAF3IP1-203ENST00000409739 SWSAP1Q6NVH7 229 aa35.2■■■■□ 3.23
TRAF3IP1-203ENST00000409739 POTEDQ86YR6 584 aa35.2■■■■□ 3.23
TRAF3IP1-203ENST00000409739 FOXP1Q9H334 677 aaPredicted RBP35.2■■■■□ 3.23
TRAF3IP1-203ENST00000409739 KIF3AQ9Y496 699 aa35.2■■■■□ 3.23
TRAF3IP1-203ENST00000409739 SAMM50Q9Y512 469 aa35.2■■■■□ 3.23
TRAF3IP1-203ENST00000409739 WNT7AO00755 349 aa35.19■■■■□ 3.22
TRAF3IP1-203ENST00000409739 SELPP16109 830 aa35.19■■■■□ 3.22
TRAF3IP1-203ENST00000409739 LRIT3Q3SXY7 679 aa35.19■■■■□ 3.22
TRAF3IP1-203ENST00000409739 PDXDC2PQ6P474 469 aa35.19■■■■□ 3.22
TRAF3IP1-203ENST00000409739 PSRC1Q6PGN9 363 aaPredicted RBP35.19■■■■□ 3.22
TRAF3IP1-203ENST00000409739 B3GNT9Q6UX72 402 aa35.19■■■■□ 3.22
TRAF3IP1-203ENST00000409739 LRRC8DQ7L1W4 858 aa35.19■■■■□ 3.22
TRAF3IP1-203ENST00000409739 LOXHD1Q8IVV2 1947 aa35.19■■■■□ 3.22
TRAF3IP1-203ENST00000409739 DISC1Q9NRI5 854 aa35.19■■■■□ 3.22
TRAF3IP1-203ENST00000409739 IGSF9BQ9UPX0 1349 aa35.18■■■■□ 3.22
TRAF3IP1-203ENST00000409739 POTEB3A0JP26 581 aa35.18■■■■□ 3.22
TRAF3IP1-203ENST00000409739 INSRRP14616 1297 aa35.18■■■■□ 3.22
TRAF3IP1-203ENST00000409739 GJB2P29033 226 aa35.18■■■■□ 3.22
TRAF3IP1-203ENST00000409739 SFNP31947 248 aa35.18■■■■□ 3.22
TRAF3IP1-203ENST00000409739 POTEBQ6S5H4 581 aa35.18■■■■□ 3.22
TRAF3IP1-203ENST00000409739 RNPC3Q96LT9 517 aaKnown RBP35.18■■■■□ 3.22
TRAF3IP1-203ENST00000409739 FAM20AQ96MK3 541 aa35.18■■■■□ 3.22
TRAF3IP1-203ENST00000409739 MAFBQ9Y5Q3 323 aaPredicted RBP35.18■■■■□ 3.22
TRAF3IP1-203ENST00000409739 SOX1O00570 391 aaPredicted RBP35.17■■■■□ 3.22
TRAF3IP1-203ENST00000409739 TBX3O15119 743 aa35.17■■■■□ 3.22
TRAF3IP1-203ENST00000409739 RFC2P35250 354 aa35.17■■■■□ 3.22
TRAF3IP1-203ENST00000409739 JAK3P52333 1124 aa35.17■■■■□ 3.22
TRAF3IP1-203ENST00000409739 TRAF7Q6Q0C0 670 aa35.17■■■■□ 3.22
TRAF3IP1-203ENST00000409739 ZNF365Q70YC5 407 aa35.17■■■■□ 3.22
TRAF3IP1-203ENST00000409739 ATP8B4Q8TF62 1192 aa35.17■■■■□ 3.22
TRAF3IP1-203ENST00000409739 HAS1Q92839 578 aa35.17■■■■□ 3.22
TRAF3IP1-203ENST00000409739 GABBR1Q9UBS5 961 aa35.17■■■■□ 3.22
TRAF3IP1-203ENST00000409739 TUBE1Q9UJT0 475 aa35.17■■■■□ 3.22
TRAF3IP1-203ENST00000409739 GBF1Q92538 1859 aa35.17■■■■□ 3.22
TRAF3IP1-203ENST00000409739 MBLAC1A4D2B0 266 aaPredicted RBP35.16■■■■□ 3.22
TRAF3IP1-203ENST00000409739 KIF28PB7ZC32 967 aa35.16■■■■□ 3.22
TRAF3IP1-203ENST00000409739 ATP4AP20648 1035 aa35.16■■■■□ 3.22
TRAF3IP1-203ENST00000409739 IGBP1P78318 339 aa35.16■■■■□ 3.22
TRAF3IP1-203ENST00000409739 MARCH8Q5T0T0 291 aa35.16■■■■□ 3.22
TRAF3IP1-203ENST00000409739 ZNF618Q5T7W0 954 aa35.16■■■■□ 3.22
TRAF3IP1-203ENST00000409739 DEFB128Q7Z7B8 93 aa35.16■■■■□ 3.22
TRAF3IP1-203ENST00000409739 RPUSD2Q8IZ73 545 aaKnown RBP35.16■■■■□ 3.22
TRAF3IP1-203ENST00000409739 VAV3Q9UKW4 847 aa35.16■■■■□ 3.22
TRAF3IP1-203ENST00000409739 ZSCAN21Q9Y5A6 473 aaPredicted RBP35.16■■■■□ 3.22
TRAF3IP1-203ENST00000409739 THPOP40225 353 aa35.15■■■■□ 3.22
TRAF3IP1-203ENST00000409739 CUL4AQ13619 759 aa35.15■■■■□ 3.22
TRAF3IP1-203ENST00000409739 MIER3Q7Z3K6 550 aa35.15■■■■□ 3.22
TRAF3IP1-203ENST00000409739 RDM1Q8NG50 284 aa35.15■■■■□ 3.22
TRAF3IP1-203ENST00000409739 TNPO1Q92973 898 aaKnown RBP35.15■■■■□ 3.22
TRAF3IP1-203ENST00000409739 SMC3Q9UQE7 1217 aa35.15■■■■□ 3.22
TRAF3IP1-203ENST00000409739 RRN3P2A6NIE6 340 aa35.14■■■■□ 3.22
TRAF3IP1-203ENST00000409739 PFKMP08237 780 aa35.14■■■■□ 3.22
TRAF3IP1-203ENST00000409739 RUFY4Q6ZNE9 571 aa35.14■■■■□ 3.22
TRAF3IP1-203ENST00000409739 NOSTRINQ8IVI9 506 aa35.14■■■■□ 3.22
TRAF3IP1-203ENST00000409739 TRAPPC12Q8WVT3 735 aa35.14■■■■□ 3.22
TRAF3IP1-203ENST00000409739 SZT2Q5T011 3432 aa35.13■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms