RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 ATP4AP20648 1035 aa16.65■□□□□ 0.26
SUMO1-207ENST00000409498 PRPHP41219 470 aa16.65■□□□□ 0.26
SUMO1-207ENST00000409498 EPHA7Q15375 998 aa16.65■□□□□ 0.26
SUMO1-207ENST00000409498 SWSAP1Q6NVH7 229 aa16.65■□□□□ 0.26
SUMO1-207ENST00000409498 MIER3Q7Z3K6 550 aa16.65■□□□□ 0.26
SUMO1-207ENST00000409498 C7orf31Q8N865 590 aa16.65■□□□□ 0.26
SUMO1-207ENST00000409498 GLG1Q92896 1179 aa16.65■□□□□ 0.26
SUMO1-207ENST00000409498 TNPO1Q92973 898 aaKnown RBP16.65■□□□□ 0.26
SUMO1-207ENST00000409498 CTAGE1Q96RT6 745 aa16.65■□□□□ 0.26
SUMO1-207ENST00000409498 NR2E3Q9Y5X4 410 aa16.65■□□□□ 0.26
SUMO1-207ENST00000409498 MYH9P35579 1960 aaKnown RBP16.65■□□□□ 0.26
SUMO1-207ENST00000409498 KIAA0355O15063 1070 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 MARCH6O60337 910 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 CLTBP09497 229 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 SMIM10L2AP0DMW4 78 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 SMIM10L2BP0DMW5 78 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 TXKP42681 527 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 FXR2P51116 673 aaKnown RBP eCLIP16.64■□□□□ 0.25
SUMO1-207ENST00000409498 ATP2C1P98194 919 aaPredicted RBP16.64■□□□□ 0.25
SUMO1-207ENST00000409498 PTGDRQ13258 359 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 NBR1Q14596 966 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 PLCB4Q15147 1175 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 FERMT3Q86UX7 667 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 PDLIM7Q9NR12 457 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 TBX21Q9UL17 535 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 MORC2Q9Y6X9 1032 aaPredicted RBP16.64■□□□□ 0.25
SUMO1-207ENST00000409498 NRCAMQ92823 1304 aa16.64■□□□□ 0.25
SUMO1-207ENST00000409498 BACH1O14867 736 aa16.63■□□□□ 0.25
SUMO1-207ENST00000409498 HBP1O60381 514 aa16.63■□□□□ 0.25
SUMO1-207ENST00000409498 PQBP1O60828 265 aaKnown RBP16.63■□□□□ 0.25
SUMO1-207ENST00000409498 BMP15O95972 392 aa16.63■□□□□ 0.25
SUMO1-207ENST00000409498 ZSCAN22P10073 491 aaPredicted RBP16.63■□□□□ 0.25
SUMO1-207ENST00000409498 HIC1Q14526 733 aa16.63■□□□□ 0.25
SUMO1-207ENST00000409498 PDIA5Q14554 519 aa16.63■□□□□ 0.25
SUMO1-207ENST00000409498 ARL6IP4Q66PJ3 421 aaKnown RBP16.63■□□□□ 0.25
SUMO1-207ENST00000409498 GDF6Q6KF10 455 aaPredicted RBP16.63■□□□□ 0.25
SUMO1-207ENST00000409498 C7orf61Q8IZ16 206 aa16.63■□□□□ 0.25
SUMO1-207ENST00000409498 SPRYD3Q8NCJ5 442 aa16.63■□□□□ 0.25
SUMO1-207ENST00000409498 ATP8B4Q8TF62 1192 aa16.63■□□□□ 0.25
SUMO1-207ENST00000409498 BBXQ8WY36 941 aaPredicted RBP16.63■□□□□ 0.25
SUMO1-207ENST00000409498 HSD17B14Q9BPX1 270 aa16.63■□□□□ 0.25
SUMO1-207ENST00000409498 GABBR1Q9UBS5 961 aa16.63■□□□□ 0.25
SUMO1-207ENST00000409498 SAMM50Q9Y512 469 aa16.63■□□□□ 0.25
SUMO1-207ENST00000409498 KAT6AQ92794 2004 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 C17orf102A2RUQ5 167 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 MBLAC1A4D2B0 266 aaPredicted RBP16.62■□□□□ 0.25
SUMO1-207ENST00000409498 RRN3P2A6NIE6 340 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 CHMP2AO43633 222 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 ZNF862O60290 1169 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 STBD1O95210 358 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 P4HBP07237 508 aaKnown RBP16.62■□□□□ 0.25
SUMO1-207ENST00000409498 GNAT1P11488 350 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 RBL2Q08999 1139 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 FAM47CQ5HY64 1035 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 PDXDC2PQ6P474 469 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 NEK9Q8TD19 979 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 ATP6V0A1Q93050 837 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 FAM167AQ96KS9 214 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 TRPV6Q9H1D0 765 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 TRMT13Q9NUP7 481 aaKnown RBP16.62■□□□□ 0.25
SUMO1-207ENST00000409498 COL1A2P08123 1366 aa16.62■□□□□ 0.25
SUMO1-207ENST00000409498 TRIP12Q14669 1992 aaPredicted RBP16.61■□□□□ 0.25
SUMO1-207ENST00000409498 POTEB3A0JP26 581 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 TRIM43BA6NCK2 446 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 DKC1O60832 514 aaKnown RBP eCLIP16.61■□□□□ 0.25
SUMO1-207ENST00000409498 BRD1O95696 1058 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 F13A1P00488 732 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 DDIT3P35638 169 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 QARSP47897 775 aaKnown RBP16.61■□□□□ 0.25
SUMO1-207ENST00000409498 PSMC5P62195 406 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 PTK7Q13308 1070 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 PKP1Q13835 747 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 PTGISQ16647 500 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 UGCGQ16739 394 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 POTEBQ6S5H4 581 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 SH3RF1Q7Z6J0 888 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 C4orf19Q8IY42 314 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 IGSF22Q8N9C0 903 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 TRIM43Q96BQ3 446 aaPredicted RBP16.61■□□□□ 0.25
SUMO1-207ENST00000409498 TMEM39AQ9NV64 488 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 CEP131Q9UPN4 1083 aa16.61■□□□□ 0.25
SUMO1-207ENST00000409498 MYH15Q9Y2K3 1946 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 SLITRK3O94933 977 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 LYPLA2O95372 231 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 INSRRP14616 1297 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 MARK3P27448 753 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 TECP42680 631 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 PPFIA1Q13136 1202 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 PTPAQ15257 358 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 SF3A1Q15459 793 aaKnown RBP16.6■□□□□ 0.25
SUMO1-207ENST00000409498 GRIK4Q16099 956 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 IL17AQ16552 155 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 TMEM266Q2M3C6 531 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 ZNF484Q5JVG2 852 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 MARCH8Q5T0T0 291 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 NCAPH2Q6IBW4 605 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 RPAINQ86UA6 219 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 SERINC5Q86VE9 423 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 PPP1R13LQ8WUF5 828 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms