RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 DDNO94850 711 aaPredicted RBP6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 GNA14O95837 355 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 ARP10275 920 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 GAP43P17677 238 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 MTIF2P46199 727 aaKnown RBP6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 PSMC6P62333 389 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 RPS6P62753 249 aaKnown RBP6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 FKBP3Q00688 224 aaKnown RBP6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 TBC1D8BQ0IIM8 1120 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 PABPC4Q13310 644 aaKnown RBP eCLIP6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 GIT2Q14161 759 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 TSR1Q2NL82 804 aaKnown RBP6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 TKFCQ3LXA3 575 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 ARSHQ5FYA8 562 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 SH3D19Q5HYK7 790 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 FKBP15Q5T1M5 1219 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 RNF207Q6ZRF8 634 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 CATSPERGQ6ZRH7 1159 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 NYAP1Q6ZVC0 841 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 SULF1Q8IWU6 871 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 TPH2Q8IWU9 490 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 ZNF507Q8TCN5 953 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 NEK9Q8TD19 979 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 CPLX3Q8WVH0 158 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 C16orf45Q96MC5 204 aaPredicted RBP6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 NOC4LQ9BVI4 516 aaKnown RBP6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 JADE2Q9NQC1 790 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 KCNH7Q9NS40 1196 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 TBC1D22BQ9NU19 505 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 TRMT1Q9NXH9 659 aaKnown RBP6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 KCND2Q9NZV8 630 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 RNF181Q9P0P0 153 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 AFG3L2Q9Y4W6 797 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 COL4A3BPQ9Y5P4 624 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 UBIAD1Q9Y5Z9 338 aa6.96□□□□□ -1.3
GTF3C3-202ENST00000409364 EML1O00423 815 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 PES1O00541 588 aaKnown RBP6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 MFAP3LO75121 409 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 ITGB5P18084 799 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 CASP14P31944 242 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 HMGCS2P54868 508 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 UBXN2AP68543 259 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 PTPN21Q16825 1174 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 MUM1L1Q5H9M0 696 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 CEP135Q66GS9 1140 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 B3GNT9Q6UX72 402 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 TMTC1Q8IUR5 882 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 TMEM139Q8IV31 216 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 OR8K1Q8NGG5 319 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 KIF18AQ8NI77 898 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 ZC3H15Q8WU90 426 aaKnown RBP6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 HPS3Q969F9 1004 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 ATG4CQ96DT6 458 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 CNOT6LQ96LI5 555 aaKnown RBP6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 CEP63Q96MT8 703 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 RMDN3Q96TC7 470 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 SYT17Q9BSW7 474 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 BHMT2Q9H2M3 363 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 RGL1Q9NZL6 768 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 LUC7L2Q9Y383 392 aaKnown RBP6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 PCDHA2Q9Y5H9 948 aa6.95□□□□□ -1.3
GTF3C3-202ENST00000409364 TRAF5O00463 557 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 TBCAO75347 108 aaKnown RBP6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 GYPCP04921 128 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 P4HBP07237 508 aaKnown RBP6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 FECHP22830 423 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 IREB2P48200 963 aaKnown RBP6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 CYP4A11Q02928 519 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 BAATQ14032 418 aaPredicted RBP6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 CTTNQ14247 550 aaKnown RBP6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 LRRC41Q15345 812 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 EDRF1Q3B7T1 1238 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 FIGNQ5HY92 759 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 ARHGEF16Q5VV41 709 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 RINT1Q6NUQ1 792 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 MIER3Q7Z3K6 550 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 VSIG10LQ86VR7 867 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 ZNF397Q8NF99 534 aaPredicted RBP6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 REPS2Q8NFH8 660 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 MYRIPQ8NFW9 859 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 NSUN6Q8TEA1 469 aaKnown RBP6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 DYDC2Q96IM9 177 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 PPP1R13BQ96KQ4 1090 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 TAAR1Q96RJ0 339 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 ERGIC2Q96RQ1 377 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 TEX13BQ9BXU2 312 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 UNC45AQ9H3U1 944 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 ZHX3Q9H4I2 956 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 ZSWIM4Q9H7M6 989 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 HOMER2Q9NSB8 354 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 RNF146Q9NTX7 359 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 COL20A1Q9P218 1284 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 SEL1LQ9UBV2 794 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 CAPN11Q9UMQ6 739 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 CSADQ9Y600 493 aa6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 BRCA1P38398 1863 aaKnown RBP6.94□□□□□ -1.3
GTF3C3-202ENST00000409364 FRMPD4Q14CM0 1322 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 NPHP3-ACAD11A0A0J9YXS1 232 aa6.93□□□□□ -1.3
GTF3C3-202ENST00000409364 USP27XA6NNY8 438 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms