RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 RNF113AO15541 343 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 BAG3O95817 575 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 IL1R1P14778 569 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 PEX19P40855 299 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 PTPN12Q05209 780 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 KCNJ12Q14500 433 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 SETDB1Q15047 1291 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 SAFBQ15424 915 aaKnown RBP eCLIP11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 NTRK3Q16288 839 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 QPCTQ16769 361 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 ANGEL2Q5VTE6 544 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 SH3TC2Q8TF17 1288 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 AGAP11Q8TF27 550 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 NUP133Q8WUM0 1156 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 FERMT2Q96AC1 680 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 PAGE5Q96GU1 130 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 LACRTQ9GZZ8 138 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 ISCUQ9H1K1 167 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 THAP9Q9H5L6 903 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 RYDENQ9NUL5 291 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 MYH13Q9UKX3 1938 aa11.64□□□□□ -0.55
NIF3L1-204ENST00000409357 MROH5Q6ZUA9 1318 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 LRRD1A4D1F6 860 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 OPLAHO14841 1288 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 RNF8O76064 485 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 SSBP05455 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 NQO1P15559 274 aaKnown RBP11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 TOB1P50616 345 aaPredicted RBP11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 RCAN1P53805 252 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 EIF3BP55884 814 aaKnown RBP11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 MAP3K12Q12852 859 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 PAK1Q13153 545 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 PSMD2Q13200 908 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 CUL3Q13618 768 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 SPA17Q15506 151 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 METTL24Q5JXM2 366 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 ATG9AQ7Z3C6 839 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 ZNF804AQ7Z570 1209 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 CPLX4Q7Z7G2 160 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 CROCCP2Q86T23 111 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 TRIM74Q86UV6 250 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 TRIM73Q86UV7 250 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 SGMS1Q86VZ5 419 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 TMEM87BQ96K49 555 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 FAM84BQ96KN1 310 aaPredicted RBP11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 NEUROD6Q96NK8 337 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 ZNF317Q96PQ6 595 aaPredicted RBP11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 TRAPPC9Q96Q05 1148 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 GORASP1Q9BQQ3 440 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 FAM129AQ9BZQ8 928 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 SUDS3Q9H7L9 328 aaPredicted RBP11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 NHEJ1Q9H9Q4 299 aaPredicted RBP11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 PLAAQ9Y263 795 aa11.63□□□□□ -0.55
NIF3L1-204ENST00000409357 MAST3O60307 1309 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 PRPF3O43395 683 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 PENKP01210 267 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 ARID4AP29374 1257 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 SKIV2L2P42285 1042 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 CARSP49589 748 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 SH3BGRP55822 239 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 ANTXR2P58335 489 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 UBXN1Q04323 297 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 UBE4AQ14139 1066 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 GALNTL6Q49A17 601 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 ZNF658Q5TYW1 1059 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 CYP4F22Q6NT55 531 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 SAPCD2Q86UD0 394 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 TLCD1Q96CP7 247 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 EDC3Q96F86 508 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 NAF1Q96HR8 494 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 PAG1Q9NWQ8 432 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 WDR35Q9P2L0 1181 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 ANAPC4Q9UJX5 808 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 PCDHB8Q9UN66 801 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 ANGEL1Q9UNK9 670 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 RPL26L1Q9UNX3 145 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 PCDHB13Q9Y5F0 798 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 TLL2Q9Y6L7 1015 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 RCCD1A6NED2 376 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 WNT10BO00744 389 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 PDE8BO95263 885 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 MMP1P03956 469 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 GSTA2P09210 222 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 HSPA1AP0DMV8 641 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 HSPA1BP0DMV9 641 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 ALDH3A1P30838 453 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 GRM1Q13255 1194 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 SNX1Q13596 522 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 GRIK5Q16478 980 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 DEFB115Q30KQ5 88 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 ANKRD20A2Q5SQ80 823 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 ANKRD20A1Q5TYW2 823 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 ANKRD20A3Q5VUR7 823 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 LMNTD2Q8IXW0 634 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 KIRREL3Q8IZU9 778 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 B4GALNT2Q8NHY0 566 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 MIPOL1Q8TD10 442 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 LZICQ8WZA0 190 aa11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 DCPSQ96C86 337 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-204ENST00000409357 RBM41Q96IZ5 413 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms