RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 SIK3Q9Y2K2 1263 aa21.4■■□□□ 1.02
LIMS2-204ENST00000409286 CETN3O15182 167 aa21.4■■□□□ 1.02
LIMS2-204ENST00000409286 NKRFO15226 690 aaKnown RBP eCLIP21.4■■□□□ 1.02
LIMS2-204ENST00000409286 MRPS9P82933 396 aaKnown RBP21.4■■□□□ 1.02
LIMS2-204ENST00000409286 RNF207Q6ZRF8 634 aa21.4■■□□□ 1.02
LIMS2-204ENST00000409286 IL31RAQ8NI17 732 aa21.4■■□□□ 1.02
LIMS2-204ENST00000409286 EPN1Q9Y6I3 576 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-204ENST00000409286 PDXKO00764 312 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 DHX15O43143 795 aaKnown RBP21.39■■□□□ 1.01
LIMS2-204ENST00000409286 SLU7O95391 586 aaKnown RBP21.39■■□□□ 1.01
LIMS2-204ENST00000409286 CASQ1P31415 396 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 KLK7P49862 253 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 HMGCS2P54868 508 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 GNG11P61952 73 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 CDK17Q00537 523 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 ADAM9Q13443 819 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 COG2Q14746 738 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 MIER3Q7Z3K6 550 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 TSC1Q92574 1164 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 EDEM3Q9BZQ6 932 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 TBC1D22BQ9NU19 505 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 TMOD4Q9NZQ9 345 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 SEL1LQ9UBV2 794 aa21.39■■□□□ 1.01
LIMS2-204ENST00000409286 CALUO43852 315 aaPredicted RBP21.38■■□□□ 1.01
LIMS2-204ENST00000409286 P4HBP07237 508 aaKnown RBP21.38■■□□□ 1.01
LIMS2-204ENST00000409286 CASP5P51878 434 aa21.38■■□□□ 1.01
LIMS2-204ENST00000409286 PGM5Q15124 567 aa21.38■■□□□ 1.01
LIMS2-204ENST00000409286 WDR59Q6PJI9 974 aa21.38■■□□□ 1.01
LIMS2-204ENST00000409286 CATSPERGQ6ZRH7 1159 aa21.38■■□□□ 1.01
LIMS2-204ENST00000409286 ERO1AQ96HE7 468 aa21.38■■□□□ 1.01
LIMS2-204ENST00000409286 CHP1Q99653 195 aa21.38■■□□□ 1.01
LIMS2-204ENST00000409286 RNF146Q9NTX7 359 aa21.38■■□□□ 1.01
LIMS2-204ENST00000409286 AGPAT5Q9NUQ2 364 aa21.38■■□□□ 1.01
LIMS2-204ENST00000409286 FAM184BQ9ULE4 1060 aa21.38■■□□□ 1.01
LIMS2-204ENST00000409286 RSPH10B2B2RC85 870 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 ATP2A1O14983 1001 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 EIF3DO15371 548 aaKnown RBP eCLIP21.37■■□□□ 1.01
LIMS2-204ENST00000409286 FAM13AO94988 1023 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 RSPH10BP0C881 870 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 MTMR1Q13613 665 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 TRIM59Q8IWR1 403 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.37■■□□□ 1.01
LIMS2-204ENST00000409286 RMDN3Q96TC7 470 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 PDCD2LQ9BRP1 358 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 LXNQ9BS40 222 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 PXMP2Q9NR77 195 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 ODF2LQ9ULJ1 636 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 AFG3L2Q9Y4W6 797 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 NDUFA10O95299 355 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 MYBP10242 640 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 EIF2AK2P19525 551 aaKnown RBP21.37■■□□□ 1.01
LIMS2-204ENST00000409286 HNRNPH3P31942 346 aaKnown RBP21.37■■□□□ 1.01
LIMS2-204ENST00000409286 ZNF131P52739 623 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 SH3D19Q5HYK7 790 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 MTERF4Q7Z6M4 381 aaKnown RBP21.37■■□□□ 1.01
LIMS2-204ENST00000409286 CCDC170Q8IYT3 715 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 ZSWIM4Q9H7M6 989 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 PARVGQ9HBI0 331 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 TYW1Q9NV66 732 aaKnown RBP21.37■■□□□ 1.01
LIMS2-204ENST00000409286 WRAP73Q9P2S5 460 aaPredicted RBP21.37■■□□□ 1.01
LIMS2-204ENST00000409286 MYPNQ86TC9 1320 aa21.37■■□□□ 1.01
LIMS2-204ENST00000409286 KIF5CO60282 957 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 USP2O75604 605 aaPredicted RBP21.36■■□□□ 1.01
LIMS2-204ENST00000409286 GUCY2CP25092 1073 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 HOXD13P35453 343 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 ITGB3BPQ13352 177 aaPredicted RBP21.36■■□□□ 1.01
LIMS2-204ENST00000409286 ARHGEF16Q5VV41 709 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 NSMFQ6X4W1 530 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 FRMD5Q7Z6J6 570 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 MYCT1Q8N699 235 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 ACRBPQ8NEB7 543 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 WNK4Q96J92 1243 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 ADARB2Q9NS39 739 aaKnown RBP21.36■■□□□ 1.01
LIMS2-204ENST00000409286 HOXC10Q9NYD6 342 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 FZD1Q9UP38 647 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 SSC5DA1L4H1 1573 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 SBF1O95248 1867 aa21.36■■□□□ 1.01
LIMS2-204ENST00000409286 ARHGEF35A5YM69 484 aa21.35■■□□□ 1.01
LIMS2-204ENST00000409286 ZBTB39O15060 712 aa21.35■■□□□ 1.01
LIMS2-204ENST00000409286 PRPF6O94906 941 aaKnown RBP21.35■■□□□ 1.01
LIMS2-204ENST00000409286 UBE4BO95155 1302 aa21.35■■□□□ 1.01
LIMS2-204ENST00000409286 LYPLA2O95372 231 aa21.35■■□□□ 1.01
LIMS2-204ENST00000409286 RPL13P26373 211 aaKnown RBP21.35■■□□□ 1.01
LIMS2-204ENST00000409286 CYLC1P35663 651 aaPredicted RBP21.35■■□□□ 1.01
LIMS2-204ENST00000409286 RBM10P98175 930 aaKnown RBP21.35■■□□□ 1.01
LIMS2-204ENST00000409286 PPP2R3AQ06190 1150 aa21.35■■□□□ 1.01
LIMS2-204ENST00000409286 BAATQ14032 418 aaPredicted RBP21.35■■□□□ 1.01
LIMS2-204ENST00000409286 SNRNP48Q6IEG0 339 aaKnown RBP21.35■■□□□ 1.01
LIMS2-204ENST00000409286 RBM46Q8TBY0 533 aaKnown RBP21.35■■□□□ 1.01
LIMS2-204ENST00000409286 ANKRD7Q92527 254 aa21.35■■□□□ 1.01
LIMS2-204ENST00000409286 WDR24Q96S15 920 aa21.35■■□□□ 1.01
LIMS2-204ENST00000409286 MAP7D2Q96T17 732 aa21.35■■□□□ 1.01
LIMS2-204ENST00000409286 MMRN2Q9H8L6 949 aa21.35■■□□□ 1.01
LIMS2-204ENST00000409286 LZTFL1Q9NQ48 299 aa21.35■■□□□ 1.01
LIMS2-204ENST00000409286 ZNF215Q9UL58 517 aaPredicted RBP21.35■■□□□ 1.01
LIMS2-204ENST00000409286 RIPK3Q9Y572 518 aa21.35■■□□□ 1.01
LIMS2-204ENST00000409286 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.35■■□□□ 1.01
LIMS2-204ENST00000409286 RBBP6Q7Z6E9 1792 aaKnown RBP21.35■■□□□ 1.01
LIMS2-204ENST00000409286 FANCGO15287 622 aa21.34■■□□□ 1.01
LIMS2-204ENST00000409286 GCNT3O95395 438 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms